Comparative analysis of the Trichoderma reeseitranscriptome during growth on the cellulase inducing substrates wheat straw and lactose

Table 2 Glycosyl hydrolases and auxiliary enzymes or proteins that are significantly expressed in T. reesei on wheat straw and/or lactose

			Wheat straw	Lactose	Wheat straw and lactose
					W > L	L > W	W = L
Transcript category			A	B	C	D	E
All CAZYs			40	7	54	4	27
cellulases	cellobiohydrolases	GH6			1
		GH7					1
	endo-β-1,4-glucanases	GH5			1
		GH7			1
		GH12			1
		GH45			1
	β-glucosidases	GH1
		GH3			7		2
	swollenin, CIP1				2
	polysaccharide monooxygenase	GH61	1				2
hemicellulases	endo-β-1,4-xylanases	GH10	1		1
		GH11	2		1
	exo-β-1,4-xylanases	GH30	1		2
	β-xylosidases	GH3	2		1
	xyloglucanase	GH74			1
	α-L-arabinofuranosidases	GH43	1		1
		GH54			2
		GH62			1
	α-D-galactosidases	GH27	1		2		4
		GH36					1
	α-D-fucosidases	GH95			1		2
	β-D-mannanases	GH5	1
	β-D-mannosidases	GH2	1		3		1
		GH38					1
		GH47	3				1
		GH76			2		1
		GH92			1		2
β-glucanases	endo-1,3/1,4-β-glucanase	GH16	2		1		1
	endo-1,3-β-glucanase	GH55	4		1		1
	endo-1,3-β-glucanase	GH64	1		1
	β-1 3-glucanosyltransferase	GH72	1	1
	endo-1,3-β-glucanase	GH81	1
polygalacturonases	exo-polygalacturonase	GH28	1
	endopolygalacturonase	GH28			1
	exo-rhamnogalacturonase	GH28			1
	α-L-rhamnosidase	GH78	1
chitinases	exo-β-D-glucosaminidase GLS93	GH20			1
	endochitinases	GH18	4		3
	N-acetyl-β-glucosaminidases	GH20	1		1
	chitosanases	GH75		1	1
	N-acetyl-β-galactosaminidases	GH89	1
carbohydrate binding proteins		CBM13				1
		CBM18				1
α-glucan hydrolases	α-D-1,4-glucosidases	GH13	1				1
	glucamylase	GH15	1
	α-D-1,4-glucosidases	GH31			3
	α,α'-trehalase	GH37				1
	α,α'-trehalase	GH65					2
	α-D-1,3-glucosidases	GH71	2				1
carbohydrate esterases		CE1	2
		CE4	1		1
	acetyl xylan esterase	CE5			3
	acetyl esterase	CE16					1
	chitin deacetylase		1
α-glucuronidases		GH67			1
		GH79					1
		GH105	1		1
		GH115			1		1

ISSN: 1754-6834