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Table 3 Identification of glycoside hydrolase (GH) family classified by CAZy database

From: Towards a metagenomic understanding on enhanced biomethane production from waste activated sludge after pH 10 pretreatment

  

Number of counts

  

Number of counts

CAZy GH family

Pfam model

UP30

UP40

P30

CAZy GH family

Pfam model

UP30

UP40

P30

GH 1

PF00232.12

11

14

15

GH 38C

PF07748.7

20

42

15

GH 2

PF00703.15

7

27

28

GH 39

PF01229.11

2

1

6

GH 2_C

PF02836.11

18

38

31

GH 42

PF02449.9

8

18

12

GH 2_N

PF02837.12

26

61

44

GH 42C

PF08533.4

0

3

3

GH 3

PF00933.15

49

69

59

GH 42 M

PF08532.4

7

5

4

GH 3_C

PF01915.16

29

39

33

GH 43

PF04616.8

12

27

33

GH 4

PF02056.10

9

20

10

GH 44

PF12891.1

1

1

2

GH 8

PF01270.1

0

0

1

GH 4C

PF11975.1

8

18

8

GH 9

PF00759.1

9

5

7

GH 53

PF07745.7

1

1

10

GH 10

PF00331.14

4

10

11

GH 57

PF03065.1

22

38

12

GH 15

PF00723.1

2

2

7

GH 62

PF03664.7

0

1

0

GH 16

PF00722.15

11

9

9

GH 63

PF03200.10

1

1

0

GH 17

PF00332.12

0

0

1

GH 65C

PF03633.9

2

2

3

GH 18

PF00704.22

7

11

7

GH 65 m

PF03632.9

19

5

12

GH 19

PF00182.13

0

0

1

GH 65 N

PF03636.9

3

8

5

GH 20

PF00728.16

25

40

22

GH 67C

PF07477.6

2

5

1

GH 20b

PF02838.9

12

6

7

GH 67 M

PF07488.6

3

6

7

GH 25

PF01183.14

7

8

8

GH 67 N

PF03648.8

4

9

5

GH 26

PF02156.9

5

10

6

GH 76

PF03663.8

0

1

1

GH 28

PF00295.11

2

16

11

GH 77

PF02446.11

7

26

17

GH 30

PF02055.10

3

8

11

GH 81

PF03639.7

0

0

1

GH 31

PF01055.20

20

29

30

GH 88

PF07470.1

9

10

18

GH 32C

PF08244.6

0

5

0

GH 92

PF07971.6

34

49

46

GH 32 N

PF00251.14

4

4

3

GH 97

PF10566.3

15

49

26

GH 35

PF01301.13

12

4

18

GH 101

PF12905.1

7

3

7

GH 38

PF01074.16

8

26

21

GH cc

PF11790.2

1

2

2

     

Total number of counts

468

792

657

  1. Legend: Dynamic process in enzymology with time and substrate nature was observed in the bioreactors, the heightened GH and abundance (in bold) in the pretreated-sludge bioreactor were correlated with a higher sludge solubilization, and in turns a higher SCFA production.