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Table 4 Numbers and assignments of metagenomic sequences matching to toxin-associated Pfam families

From: Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms

Pfam accession Pfam name Pathogen B55 S55a S65a S70a G5a G30a U1a
PF05588 C. botulinum HA-17 protein C. botulinum 27 40 35 74 25 30 32
PF05105 Holin family C. difficile and others 16 17 14 27 24 16 14
PF03496 ADP-ribosyltransferase exoenzyme C. perfringens and others 0 0 1 6 0 0 0
  1. a Numbers of reads are normalized to an equal sample size (sample B55).