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Table 3 List of 20 reference genomes showing the highest similarities to the metagenome datasets from biogas plants operating under wet or dry fermentation conditions as analyzed by fragment recruitment analysis

From: Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions

Reference sequence

Wet fermentation a

Dry fermentation a

Methanoculleus bourgensis MS2T

15,992 (1.19%)

59,969 (4.45%)

Clostridium clariflavum DSM 19732

3,840 (0.28%)

3,282 (0.24%)

Clostridium thermocellum ATCC 27405

2,464 (0.18%)

2,201 (0.16%)

Clostridium kluyveri DSM 555

1,423 (0.11%)

807 (0.06%)

Streptococcus infantarius subsp. infantarius CJ18

1,360 (0.1%)

367 (0.03%)

Thermoanaerobacterium thermosaccharolyticum DSM 571

1,234 (0.09%)

1,454 (0.11%)

Mahella australiensis 50–1 BON

1,179 (0.09%)

1,319 (0.1%)

Methanoculleus marisnigri JR1

1,014 (0.08%)

3,298 (0.24%)

Desulfotomaculum carboxydivorans CO-1-SRB

944 (0.07%)

682 (0.05%)

Clostridium difficile M120

776 (0.06%)

386 (0.03%)

Thermoanaerovibrio acidaminovorans DSM 6589

688 (0.05%)

387 (0.03%)

Syntrophomonas wolfei subsp. wolfei str. Goettingen

622 (0.05%)

358 (0.03%)

Streptococcus gallolyticus UCN34

621 (0.05%)

191 (0.01%)

Streptococcus suis GZ1

575 (0.04%)

444 (0.06%)

Streptococcus pasteurianus ATCC 43144

556 (0.04%)

176 (0.01%)

Streptococcus macedonicus ACA-DC 198

523 (0.04%)

153 (0.01%)

Thermoanaerobacter sp. X514

502 (0.04%)

310 (0.02%)

Pelotomaculum thermopropionicum SI

452 (0.03%)

533 (0.04%)

Clostridium cellulolyticum H10

437 (0.03%)

321 (0.02%)

Clostridium cellulovorans 743B

386 (0.03%)

210 (0.01%)

  1. aNumber and percentage of reads recruited for each strain determined by BLASTn analyses (reads featuring at least 90% sequence similarity to the reference genome were counted).