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Table 3 List of the top 30 most abundant ESTs in log-phase B. braunii 779 cells

From: Transcriptomic analysis of a moderately growing subisolate Botryococcus braunii 779 (Chlorophyta) in response to nitrogen deprivation

Rka EST_IDb BH_IDc FPKMd Descriptione
1 c72167_g1_i4 ChlNC64A_1|59790 12,471.445 Photosynthesis, light harvesting
2 c72167_g1_i8 Coc_C169_1|58975 10,031.55 Photosynthesis, light harvesting
3 c72102_g4_i5 Coc_C169_1|27246 7,119.695 Photosynthesis, light harvesting
4 c72167_g1_i2 Coc_C169_1|58975 6,831.27 Photosynthesis, light harvesting
5 c72167_g1_i6 Coc_C169_1|27246 6,731.515 Photosynthesis, light harvesting
6 c72102_g4_i4 Coc_C169_1|58975 4,540.985 Photosynthesis, light harvesting
7 c72167_g1_i7 Coc_C169_1|27246 3,366.845 Photosynthesis, light harvesting
8 c72102_g4_i1 Coc_C169_1|58975 2,639.815 Photosynthesis, light harvesting
9 c68174_g2_i1 Coc_C169_1|30477 2,360.575 60S ribosomal protein L23
10 c68658_g2_i1 Coc_C169_1|35121 2,110.295 Photosynthesis, light harvesting
11 c57826_g1_i1 Coc_C169_1|44136 1,790.37 Photosynthesis, light harvesting
12 c58876_g1_i1 Coc_C169_1|28488 1,713.8 Photosynthesis, light harvesting
13 c54674_g1_i1 Coc_C169_1|64185 1,710.555 Photosynthesis, light harvesting
14 c72326_g1_i2 Coc_C169_1|67011 1,573.705 Photosynthesis, light harvesting
15 c72522_g1_i1 Coc_C169_1|34109 1,538.055 Fructose-biphosphate aldolase
16 c70416_g1_i1 Coc_C169_1|27513 1,432.875 Translation elongation factor EF-1
17 c65010_g1_i1 Coc_C169_1|19247 1,314.1 Photosynthesis, light harvesting
18 c62135_g1_i1 Chlre4|184775 1,184.59 Photosynthesis, light harvesting
19 c72592_g1_i1 Coc_C169_1|35576 1,170.825 Enolase
20 c71666_g1_i1 Chlre4|140045 1,082.22 Ubiquitin and ubiquitin-like proteins
21 c58350_g1_i1 Coc_C169_1|28397 1,073.435 60S ribosomal protein L35
22 c72102_g5_i1 Coc_C169_1|28488 977.63 Photosynthesis, light harvesting
23 c70207_g1_i2 ChlNC64A_1|59626 859.85 Photosynthesis, light harvesting
24 c70122_g2_i2 Coc_C169_1|53355 839.985 Glyceraldehyde 3-phosphate dehydrogenase
25 c69841_g1_i1 Coc_C169_1|25284 823.07 Photosynthesis, light harvesting
26 c69841_g1_i3 Coc_C169_1|25284 818.15 Photosynthesis, light harvesting
27 c57090_g1_i1 Coc_C169_1|26429 790.785 60S ribosomal protein L44
28 c68918_g1_i1 Coc_C169_1|37969 772.455 Photosynthesis, light harvesting
29 c61023_g1_i1 Coc_C169_1|34169 689.075 60S ribosomal protein L30
30 c68918_g1_i2 Coc_C169_1|37969 676.53 Photosynthesis, light harvesting
  1. aRk stands for rank based on average level of FPKM.
  2. bEST_ID for ID of the B. braunii 779 ESTs.
  3. cBH_ID for EST’s best-hit consistent of species and protein ID.
  4. dFPKM for average level of individual ESTs.
  5. eDescription is based on GO annotations.