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Table 3 Genes up-regulated more than sixfold involved in furfuryl alcohol and (or) HMF alcohol degradation in A. resinae ZN1

From: Transcriptional analysis of Amorphotheca resinae ZN1 on biological degradation of furfural and 5-hydroxymethylfurfural derived from lignocellulose pretreatment

Genes

Genes ID

Functional annotation

Fold change

Furfuryl alcohol

HMF alcohol

Furan alcohols to furan aldehydes

 ADH

Arz_13908_T1

Zn-dependent alcohol dehydrogenases, propanol-preferring

16.93 ± 2.23

70.66 ± 6.23

Arz_17261_T1 a

Zn-dependent alcohol dehydrogenases, propanol-preferring

7.93 ± 2.52

718.50 ± 112.23

Arz_9803_T1

Zn-dependent alcohol dehydrogenases, propanol-preferring

12.15 ± 1.19

33.46 ± 3.60

Arz_9386_T1

Zn-dependent dehydrogenases, diacetyl reductase

–

26.21 ± 3.71

Arz_6148_T1

Short-chain dehydrogenase, 3-oxoacyl-[acyl-carrier-protein] reductase

–

21.55 ± 4.30

Arz_962_T1

Iron-dependent alcohol dehydrogenase, hydroxyacid-oxoacid transhydrogenase

8.58 ± 0.42

–

Arz_12928_T1 a

Butanediol dehydrogenase/diacetyl reductase

12.88 ± 3.19

208.74 ± 35.63

Arz_15224_T1

D-arabinitol 2-dehydrogenase

–

12.22 ± 0.60

Arz_3236_T1

Histidinol dehydrogenase

6.50 ± 1.89

7.27 ± 1.35

Furan aldehydes to furan acids

 ALDH

Arz_11689_T1

NAD-dependent aldehyde dehydrogenase, succinate-semialdehyde dehydrogenase

–

10.30 ± 0.15

Arz_15746_T1

NAD-dependent aldehyde dehydrogenase, succinate-semialdehyde dehydrogenase

–

14.82 ± 1.67

Arz_7774_T1

NAD-dependent aldehyde dehydrogenases

24.61 ± 5.15

78.80 ± 0.77

Arz_18463_T1a

Salicylaldehyde dehydrogenase

–

508.57 ± 14.95

 Oxidase

Arz_14616_T1 a

Glucose-methanol-choline oxidoreductase, alcohol oxidase

15.10 ± 2.07

901.83 ± 192.99

Arz_16317_T1

Ent-kaurene oxidase

–

7.02 ± 0.93

Arz_6529_T1

Ent-kaurene oxidase

8.54 ± 0.13

11.20 ± 0.27

  1. Italic genes are up-regulated (more than sixfold) response to both two inhibitors, furfuryl alcohol and HMF alcohol
  2. aGenes are significantly up-regulated (more than 200-fold) involved in HMF alcohol degradation
  3. – Relative expression means not up-regulated or up-regulated to relative lower level (less than sixfold)