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Table 2 Determining the reference transcripts through de novo assemblies using different sets of data

From: RNA-Seq transcriptomic analysis with Bag2D software identifies key pathways enhancing lipid yield in a high lipid-producing mutant of the non-model green alga Dunaliella tertiolecta

No.

Samples used for assembly

Size of the assembled file (MB)

Gene model

Number of non-redundant ranscripts

(i)

WT

9.4

3818

14,903

(ii)

WT + D9

16.9

5360

23,564

(iii)

Enlarged Dt-1

45.8

7023

47,276

  1. The BlastX cut-off value is E-value ≤10−6 for this comparison. The results of D. tertiolecta transcripts with BlastX hits to C. reinhardtii as reference