Comparative analysis of the secretomes of Schizophyllum commune and other wood-decay basidiomycetes during solid-state fermentation reveals its unique lignocellulose-degrading enzyme system

Table 4 Summary of cellulose-degrading proteins identified in the secretomes of four fungi

Species	Accession no.^a	Family^b	Predicted protein^a	Up^c	SignalP^d
S. commune	Endoglucanase
	Schco3\|2602020	GH5	endo-β-1,4-glucanase	18	N
	Schco3\|2151684	GH5	endo-β-1,4-glucanase	7	Y
	Schco3\|17204	GH45	endo-β-1,4-glucanase	5	Y
	Exoglucanase
	Schco3\|17408	GH6	cellobiohydrolase	11	Y
	Schco3\|13879	GH7	reducing end-acting cellobiohydrolase	17	Y
	Schco3\|2361770	GH7	reducing end-acting cellobiohydrolase	12	Y
	Β-glucosidase
	Schco3\|2450343	GH1	β-glucosidase	9	N
	Schco3\|105341	GH1	β-glucosidase	2	Y
	Schco3\|2266284	GH3	β-glucosidase	16	N
	Schco3\|2003814	GH3	β-glucosidase	13	Y
	Schco3\|1099292	GH3	β-glucosidase	4	N
	Schco3\|2026622	GH3	β-glucosidase	20	N
P. chrysosporium	Endoglucanase
	Phchr2\|2536644	GH5,CBM1	endoglucanase	2	Y
	Phchr2\|2864492	GH5,CBM1	endoglucanase	2	Y
	Exoglucanase
	Phchr2\|133052	GH6,CBM1	exocellobiohydrolase	5	Y
	Phchr2\|129072	GH7,CBM1	1,4-β-cellobiohydrolase	8	Y
	Phchr2\|137372	GH7,CBM1	cellobiohydrolase	5	Y
	Β-glucosidase
	Phchr2\|139063	GH3	β-glucosidase	3	Y
	Phchr2\|1854790	GH3	β-glucosidase	3	N
	Phchr2\|2894234	GH3,CBM1	β-glucosidase	2	Y
C. subvermispora	Endoglucanase
	Cersu1\|106487	GH5	endoglucanase	7	N
	Cersu1\|102329	GH5,CBM1	endoglucanase	2	Y
	Β-glucosidase
	Cersu1\|108602	GH3	β-glucosidase	13	Y
	Cersu1\|103439	GH3	β-glucosidase	8	Y
G. trabeum	Endoglucanase
	Glotr1_1\|57704	GH5	endoglucanase	9	Y
	Glotr1_1\|63180	GH5	endoglucanase	7	Y
	Glotr1_1\|138821	GH12	endo-1,4-β-glucanase	4	Y
	Β-glucosidase
	Glotr1_1\|71534	GH3	β-glucosidase	14	Y
	Glotr1_1\|75899	GH3	β-glucosidase	18	N
	Glotr1_1\|46629	GH30	β-glucosidase	5	Y
	Glotr1_1\|75778	GH30	β-glucosidase	7	Y

^aAccession numbers and predicted proteins were obtained from the corresponding Joint Genome Institute (JGI) databases
^bFamily information was obtained from the carbohydrate-active enzyme database (CAZy)
^cUnique peptides
^dPrediction of signal peptides was based on SignalP analysis

ISSN: 2731-3654