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Table 2 Transcriptional activities of genes potentially involved in interspecies electron transfer for syntrophic metabolism of the five curated Anaerolineae genomes

From: Cellular adhesiveness and cellulolytic capacity in Anaerolineae revealed by omics-based genome interpretation

Interspecies electron transfer

 

DIET

H2/Formate

PilAa

CytCa

Hyda

FDHa

TCF-2

984.5

N/A

0.0

0.3

TCF-5

261.5

N/A

1.6

0.2

TCF-12

1651.6

N/A

0

0

TCF-8

0

N/A

0

0

TCF-13

0

N/A

0

0

  1. N/A the target gene is absent from the curated genomes, pilA pilus assembly protein Flp/PilA, CytC c-type cytochrome, MtrC/OmcA family, Hyd hydrogenase, FDH formate dehydrogenase
  2. aGene identification is based on the integration of COGs, TIGRFAMs, and KEGG KO orthology as listed in Additional file 1: Table S9