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Table 4 Clone sequences of cel5 and cel48 obtained from industrial-scale biogas processes

From: The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests

Clone T-RFs (bp) Most closely related microorganism Identity (%) Accession number
Cel5
OTU01 56 Ruminococcus callidus 84.8 WP_021681794
OTU02a 85 Echinicola vietnamensis 58.0 WP_015264998
OTU03b 85 Echinicola vietnamensis 61.4 WP_015264998
OTU04c 106 Flavobacterium sp. 66.3 WP_007808671
OTU05 136 Niastella koreensis 73.7 AEV98714
OTU06d 211 Marinilabilia salmonicolor 66.3 WP_036163195
OTU07e 275 Mahella australiensis 57.4 AEE96311
OTU08f 362 Mahella australiensis 58.4 AEE96311
OTU09 375 Clostridium sp. 72.1 WP_033166154
OTU10 396 Clostridium cellulolyticum 100 WP_015924614
Cel48
OTU01 68 Clostridium stercorarium DSM 8532 57.9 AGI39871
OTU02 68 Clostridium sp. Iso6-17a 50.0 ADM52292
OTU03 177 Ruminococcus sp. CAG:254 97.5 CCZ84184
OTU04g 205 Clostridium sp. Iso6-24 79.0 ADM52293
OTU05 238 Ruminococcus sp. HUN007 83.2 WP_049962845
OTU06 238 Streptomyces griseorubens 61.0 WP_037642616
OTU07h 247 Acetivibrio cellulolyticus 71.2 WP_010681059
OTU08 290 Clostridium acetobutylicum 50.5 WP_010964229
OTU09i 321 Ruminiclostridium thermocellum 75.0 ACT46162
OTU10j 328 Clostridium termitidis CT1112 73.8 EMS73539
OTU11k 358 Clostridium straminisolvens JCM 21531 78.8 GAE90081
  1. aMost closely related to uncultured bacterium AGW24153 (identity: 100 %) from laboratory-scale anaerobic reactor
  2. bMost closely related to uncultured bacterium AGW24153 (identity: 89.1 %) from laboratory-scale anaerobic reactor
  3. cMost closely related to uncultured bacterium ACV50344 (identity: 73.3 %) from lignocellulose-based sulphate-reducing bioreactor
  4. dMost closely related to uncultured bacterium AGO64733 (identity: 75.0 %) from anaerobic digester sludge
  5. eMost closely related to uncultured bacterium AEV59723 (identity: 77.0 %) from laboratory biogas digester treating rice straw
  6. fMost closely related to uncultured bacterium AEV59723 (identity: 76.0 %) from laboratory biogas digester treating rice straw
  7. gMost closely related to uncultured bacterium AGO64695 (identity: 99.0 %) from anaerobic digester sludge
  8. hMost closely related to uncultured bacterium AGO64692 (identity: 75.2 %) from anaerobic digester sludge
  9. iMost closely related to uncultured bacterium AGO64682 (identity: 85.6 %) from anaerobic digester sludge
  10. jMost closely related to uncultured bacterium AGO64673 (identity: 99.1 %) from anaerobic digester sludge
  11. kMost closely related to uncultured bacterium AGO64695 (identity: 99.0 %) from anaerobic digester sludge