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Table 4 Clone sequences of cel5 and cel48 obtained from industrial-scale biogas processes

From: The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests

Clone

T-RFs (bp)

Most closely related microorganism

Identity (%)

Accession number

Cel5

OTU01

56

Ruminococcus callidus

84.8

WP_021681794

OTU02a

85

Echinicola vietnamensis

58.0

WP_015264998

OTU03b

85

Echinicola vietnamensis

61.4

WP_015264998

OTU04c

106

Flavobacterium sp.

66.3

WP_007808671

OTU05

136

Niastella koreensis

73.7

AEV98714

OTU06d

211

Marinilabilia salmonicolor

66.3

WP_036163195

OTU07e

275

Mahella australiensis

57.4

AEE96311

OTU08f

362

Mahella australiensis

58.4

AEE96311

OTU09

375

Clostridium sp.

72.1

WP_033166154

OTU10

396

Clostridium cellulolyticum

100

WP_015924614

Cel48

OTU01

68

Clostridium stercorarium DSM 8532

57.9

AGI39871

OTU02

68

Clostridium sp. Iso6-17a

50.0

ADM52292

OTU03

177

Ruminococcus sp. CAG:254

97.5

CCZ84184

OTU04g

205

Clostridium sp. Iso6-24

79.0

ADM52293

OTU05

238

Ruminococcus sp. HUN007

83.2

WP_049962845

OTU06

238

Streptomyces griseorubens

61.0

WP_037642616

OTU07h

247

Acetivibrio cellulolyticus

71.2

WP_010681059

OTU08

290

Clostridium acetobutylicum

50.5

WP_010964229

OTU09i

321

Ruminiclostridium thermocellum

75.0

ACT46162

OTU10j

328

Clostridium termitidis CT1112

73.8

EMS73539

OTU11k

358

Clostridium straminisolvens JCM 21531

78.8

GAE90081

  1. aMost closely related to uncultured bacterium AGW24153 (identity: 100 %) from laboratory-scale anaerobic reactor
  2. bMost closely related to uncultured bacterium AGW24153 (identity: 89.1 %) from laboratory-scale anaerobic reactor
  3. cMost closely related to uncultured bacterium ACV50344 (identity: 73.3 %) from lignocellulose-based sulphate-reducing bioreactor
  4. dMost closely related to uncultured bacterium AGO64733 (identity: 75.0 %) from anaerobic digester sludge
  5. eMost closely related to uncultured bacterium AEV59723 (identity: 77.0 %) from laboratory biogas digester treating rice straw
  6. fMost closely related to uncultured bacterium AEV59723 (identity: 76.0 %) from laboratory biogas digester treating rice straw
  7. gMost closely related to uncultured bacterium AGO64695 (identity: 99.0 %) from anaerobic digester sludge
  8. hMost closely related to uncultured bacterium AGO64692 (identity: 75.2 %) from anaerobic digester sludge
  9. iMost closely related to uncultured bacterium AGO64682 (identity: 85.6 %) from anaerobic digester sludge
  10. jMost closely related to uncultured bacterium AGO64673 (identity: 99.1 %) from anaerobic digester sludge
  11. kMost closely related to uncultured bacterium AGO64695 (identity: 99.0 %) from anaerobic digester sludge