Transcriptome profiling of Camelina sativa to identify genes involved in triacylglycerol biosynthesis and accumulation in the developing seeds

Table 2 Stages of Camelina seed development and RNA-Seq data sets

	Cs-14 (10–15 DAF)				Cs-21 (16–21 DAF)
	Bio Rep 1	Bio Rep 2	Bio Rep 3	Mean ± SD	Bio Rep 1	Bio Rep 2	Bio Rep 3	Mean ± SD
Number of sequence reads	53.0 M	54.8 M	78.9 M	62.23 ± 14.46	62.0 M	61.7 M	46.3 M	56.6 ± 8.9
Number of reads after trimming	52.0 M	53.7 M	72.5 M	59.40 ± 11.37	60.7 M	60.5 M	45.4 M	55.5 ± 8.7
Reads mapped in pairs	44.8 M	45.6 M	67.3 M	52.57 ± 12.76	50.7 M	51.1 M	38.6 M	46.8 ± 7.1
Reads mapped in broken pairs	5.9 M	6.7 M	8.4 M	7.00 ± 1.27	8.4 M	7.9 M	5.8 M	7.36 ± 1.3
Reads not mapped	210,281	241,410	372,878	274,856 ± 86,304	319,246	286,780	184,244	263,416 ± 70,466

Shown are the two stages of Camelina seed development used for RNA-Seq. The number of processed reads obtained from three biological replicates at different levels of data analysis of RNA sequencing (in millions M)
DAF days after flowering; SD standard deviation

ISSN: 2731-3654