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Table 1 Shows the origin of the reactions added to the reaction database

From: Whole-genome metabolic model of Trichoderma reesei built by comparative reconstruction

Species Source Reactions % of matched reactions % of balanced reactions Selected as representative Representatives that balance
S. cerevisiae ymn6.06 1888 96 90 1020 923
A. niger iMA871 1399 57 95 266 262
A. nidulans iHD666 1303 85 69 88 72
A. oryzae iWV1314 2360 93 74 265 235
K. (Pichia) pastoris iLC915 1423 88 91 237 207
P. stipitis iSS884 1332 88 92 6 5
P. chrysogenum iAL1006 1636 83 95 75 67
KEGG reaction KEGG 9236 93 90 6618 6376
MetaCyc MetaCyc 11,181 62 90 3145 3054
Total   31,758 77 88 11,720 11,201
  1. A fully resolved reaction is a reaction having all reactants identified by metabolites in the updated database. All representative reactions balance elements other than hydrogen. Reactions that also balance electrons are denoted “reactions that balance"