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Fig. 3 | Biotechnology for Biofuels

Fig. 3

From: Experimental recreation of the evolution of lignin-degrading enzymes from the Jurassic to date

Fig. 3

Molecular models of the reconstructed ancestors and extant LiP. The hypothetical location of heme, two Ca2+ ions, ancestral Mn2+-binding site formed by two glutamate and one aspartate residues (red asterisks), evolved lignin-oxidizing exposed tryptophan (blue asterisks), and other relevant residues (Fig. 2) are shown on the ancestor models, built using three related crystal structures (4BM1, 3FJW, and 1QPA) as templates [57], and LiPH8 crystal structure (PDB 1B82). The models are shown on a schematic representation of evolution (see Fig. 1). The blue and gray arrows show the amino acids that appeared in the main evolutionary events and defined new activities (gain of catalytic Trp172 and loss of Mn2+-binding site, respectively)

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