| Glycosyl residue composition of cell wall fractions (mol% ± SE) | ||||||||
---|---|---|---|---|---|---|---|---|---|
Ara | Rha | Fuc | Xyl | GlcA | GalA | Man | Gal | Glc | |
Ammonium oxalate | |||||||||
 WT | 19.5 ± 0.8 | 5.1 ± 0.2 | 0.7 ± 0.02 | 8.4 ± 0.3 | 0.7 ± 0.01 | 23.6 ± 0.6 | 11.8 ± 0.7 | 4.5 ± 0.2 | 25.7 ± 1.3 |
 V Control-1 | 18.9 ± 0.9 | 4.8 ± 0.1 | 0.7 ± 0.03 | 8.5 ± 0.3 | 0.7 ± 0.01 | 23.4 ± 0.7 | 12.6 ± 0.6 | 4.1 ± 0.2 | 26.3 ± 1.2 |
 AB29.2 | 17.6 ± 0.9 | 5.3 ± 0.2 | 0.6 ± 0.02 | 10.2 ± 0.2* | 0.7 ± 0.01 | 26.5 ± 0.8* | 11.9 ± 0.4 | 5.1 ± 0.1* | 22.5 ± 1.1* |
 AB29.7 | 18.1 ± 0.5 | 5.6 ± 0.1* | 0.6 ± 0.02 | 10.5 ± 0.3* | 0.6 ± 0.01 | 27.4 ± 0.9* | 12.1 ± 0.6 | 4.8 ± 0.2 | 20.2 ± 0.9* |
 AB29.12 | 17.9 ± 0.6 | 5.4 ± 0.2 | 0.7 ± 0.03 | 10.7 ± 0.4** | 0.7 ± 0.01 | 28.1 ± 0.5* | 12.2 ± 0.5 | 4.7 ± 0.1 | 19.6 ± 1.1* |
Sodium carbonate | |||||||||
 WT | 11.3 ± 0.6 | 5.8 ± 0.2 | 0.3 ± 0.03 | 22.4 ± 0.5 | 1.6 ± 0.06 | 18.9 ± 0.5 | 15.1 ± 0.6 | 6.8 ± 0.2 | 17.8 ± 0.8 |
 V Control-1 | 11.4 ± 0.5 | 6.0 ± 0.3 | 0.2 ± 0.03 | 22.3 ± 0.5 | 1.3 ± 0.05 | 18.7 ± 0.6 | 15.3 ± 0.5 | 6.5 ± 0.3 | 18.3 ± 0.7 |
 AB29.2 | 8.3 ± 0.5* | 5.1 ± 0.3 | 0.4 ± 0.04 | 26.3 ± 0.3* | 2.3 ± 0.06 | 22.9 ± 0.4* | 14.6 ± 0.4 | 5.2 ± 0.2* | 14.9 ± 0.6* |
 AB29.7 | 8.1 ± 0.4* | 5.5 ± 0.2 | 0.3 ± 0.03 | 26.9 ± 0.4* | 2.4 ± 0.05 | 23.6 ± 0.7* | 14.1 ± 0.6 | 4.9 ± 0.2* | 14.2 ± 0.7* |
 AB29.12 | 7.8 ± 0.6* | 5.4 ± 0.3 | 0.5 ± 0.02 | 27.6 ± 0.6* | 2.5 ± 0.06 | 25.7 ± 0.6* | 13.5 ± 0.5* | 4.7 ± 0.3* | 12.3 ± 0.8* |
1Â M KOH | |||||||||
 WT | 0.3 ± 0.01 | 3.7 ± 0.1 | 0.2 ± 0.01 | 69.9 ± 1.3 | 8.7 ± 0.2 | 3.2 ± 0.1 | 5.9 ± 0.2 | 1.4 ± 0.08 | 6.7 ± 0.2 |
 V Control-1 | 0.2 ± 0.01 | 3.5 ± 0.1 | 0.2 ± 0.01 | 70.0 ± 1.5 | 8.7 ± 0.3 | 3.1 ± 0.1 | 6.0 ± 0.3 | 1.6 ± 0.05 | 6.7 ± 0.4 |
 AB29.2 | 0.3 ± 0.02 | 1.1 ± 0.1* | 0.3 ± 0.01 | 79.8 ± 2.1* | 9.9 ± 0.1* | 3.6 ± 0.05* | 2.3 ± 0.3* | 0.9 ± 0.06** | 1.8 ± 0.3** |
 AB29.7 | 0.2 ± 0.01 | 1.2 ± 0.3* | 0.2 ± 0.01 | 81.1 ± 2.7* | 9.9 ± 0.2* | 3.7 ± 0.06* | 1.1 ± 0.2* | 0.6 ± 0.09** | 2.0 ± 0.4** |
 AB29.12 | 0.2 ± 0.01 | 0.7 ± 0.3* | 0.1 ± 0.01 | 82.2 ± 2.2** | 10.0 ± 0.2* | 3.9 ± 0.06** | 1.2 ± 0.4* | 0.2 ± 0.06** | 1.5 ± 0.5** |
4Â M KOH | |||||||||
 WT | 2.1 ± 0.09 | 3.2 ± 0.1 | 0.3 ± 0.02 | 39.1 ± 1.4 | 4.7 ± 0.2 | 0.9 ± 0.03 | 10.8 ± 0.5 | 6.6 ± 0.2 | 32.3 ± 1.6 |
 V Control-1 | 2.1 ± 0.03 | 3.1 ± 0.1 | 0.4 ± 0.02 | 39.0 ± 1.1 | 4.8 ± 0.1 | 0.9 ± 0.03 | 11.0 ± 0.3 | 6.9 ± 0.3 | 31.8 ± 1.7 |
 AB29.2 | 2.2 ± 0.06 | 3.6 ± 0.08 | 0.5 ± 0.02 | 46.7 ± 1.3* | 5.7 ± 0.2* | 1.2 ± 0.05* | 10.5 ± 0.6** | 4.9 ± 0.4 | 24.7 ± 1.5* |
 AB29.7 | 1.8 ± 0.05 | 3.4 ± 0.1 | 0.4 ± 0.01 | 44.3 ± 1.1* | 5.4 ± 0.1* | 1.1 ± 0.03* | 9.6 ± 0.3* | 5.8 ± 0.6** | 28.2 ± 1.4* |
 AB29.12 | 2.0 ± 0.06 | 3.8 ± 0.09* | 0.3 ± 0.01 | 49.8 ± 1.5** | 6.1 ± 0.2* | 1.2 ± 0.03** | 8.7 ± 0.5** | 4.8 ± 0.3* | 23.3 ± 1.6** |
Sodium chlorite | |||||||||
 WT | 6.7 ± 0.3 | 3.9 ± 0.2 | 0.1 ± 0.01 | 11.6 ± 0.4 | 0.9 ± 0.03 | 7.8 ± 0.2 | 2.0 ± 0.04 | 11.7 ± 0.3 | 55.4 ± 1.5 |
 V Control-1 | 6.9 ± 0.4 | 4.1 ± 0.2 | 0.2 ± 0.01 | 11.4 ± 0.6 | 0.8 ± 0.04 | 6.9 ± 0.2 | 1.9 ± 0.06 | 11.8 ± 0.4 | 56.0 ± 1.4 |
 AB29.2 | 5.8 ± 0.4* | 5.1 ± 0.1* | – | 14.5 ± 0.4* | 1.1 ± 0.03 | 8.9 ± 0.2* | 1.7 ± 0.08* | 11.6 ± 0.5 | 51.3 ± 1.1 |
 AB29.7 | 6.1 ± 0.2* | 4.3 ± 0.1* | – | 13.3 ± 0.3* | 1.0 ± 0.02 | 8.6 ± 0.1* | 1.5 ± 0.09* | 12.3 ± 0.4 | 52.9 ± 1.3 |
 AB29.12 | 6.2 ± 0.3* | 5.0 ± 0.2* | – | 15.4 ± 0.5** | 1.3 ± 0.05 | 10.1 ± 0.3* | 1.4 ± 0.1** | 11.1 ± 0.6 | 49.5 ± 0.9* |
4Â M KOH PC | |||||||||
 WT | 0.9 ± 0.03 | 2.2 ± 0.06 | 0 | 66.4 ± 1.9 | 8.2 ± 0.3 | 2.1 ± 0.09 | 6.0 ± 0.2 | 4.7 ± 0.3 | 9.5 ± 0.6 |
 V Control-1 | 0.9 ± 0.05 | 2.3 ± 0.07 | 0 | 66.0 ± 2.6 | 8.1 ± 0.4 | 2.0 ± 0.10 | 5.9 ± 0.3 | 5.0 ± 0.3 | 9.8 ± 0.3 |
 AB29.2 | 1.0 ± 0.03 | 2.5 ± 0.06* | 0 | 78.3 ± 1.3* | 9.6 ± 0.3* | 2.7 ± 0.04* | 1.9 ± 0.3** | 1.3 ± 0.2* | 2.7 ± 0.3** |
 AB29.7 | 0.9 ± 0.04 | 2.4 ± 0.08* | 0 | 75.1 ± 1.2* | 9.4 ± 0.2* | 2.5 ± 0.05* | 3.5 ± 0.2* | 1.6 ± 0.3** | 4.6 ± 0.4* |
 AB29.12 | 0.6 ± 0.06 | 2.3 ± 0.07 | 0 | 80.8 ± 1.5** | 9.8 ± 0.4** | 2.8 ± 0.07** | 1.0 ± 0.4** | 0.8 ± 0.2** | 1.9 ± 0.2** |
Insoluble | |||||||||
 WT | 3.9 ± 0.3 | 2.8 ± 0.1 | 0.2 ± 0.02 | 14.9 ± 0.3 | 0.2 ± 0.03 | 3.0 ± 0.4 | 9.5 ± 0.3 | 5.6 ± 0.1 | 59.9 ± 0.9 |
 V Control-1 | 4.0 ± 0.1 | 3.1 ± 0.1 | 0.3 ± 0.03 | 15.3 ± 0.2 | 0.2 ± 0.04 | 2.9 ± 0.6 | 9.9 ± 0.2 | 5.4 ± 0.3 | 58.9 ± 0.8 |
 AB29.2 | 3.9 ± 0.3 | 3.5 ± 0.1** | 0.2 ± 0.02 | 16.0 ± 0.4* | 0.2 ± 0.02 | 4.9 ± 0.3** | 5.9 ± 0.3** | 1.8 ± 0.2** | 63.6 ± 0.7 |
 AB29.7 | 3.8 ± 0.3 | 3.8 ± 0.09** | 0.3 ± 0.02 | 16.4 ± 0.3* | 0.3 ± 0.01 | 4.7 ± 0.5** | 4.7 ± 0.4** | 1.7 ± 0.3** | 64.3 ± 0.6* |
 AB29.12 | 3.8 ± 0.3 | 4.1 ± 0.1** | 0.3 ± 0.03 | 17.0 ± 0.5* | 0.2 ± 0.02 | 5.5 ± 0.4** | 3.5 ± 0.4** | 1.4 ± 0.2** | 64.2 ± 0.7* |