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Table 4 Putative gene repertoires of the large vinasse bins

From: Genome-resolved metagenomics of sugarcane vinasse bacteria

  1. Keyword searches of prokka annotation results (gray, “Y”) were supplemented in the case of the N2O metabolism-related genes with hmm profile search results (colors). Substrates for the genes related to N2O metabolism are included (colors above genes)
  2. No genes related to the metabolism of caproic acid were found in the bin annotations. No amoABC, hao, nxr nor, nirS genes were found in the bin annotations, but the amoA AOA gene was identified in Bin 23 and 40.1 and the amoA AOB gene was identified in Bin 33 by HMM matches
  3. ABR antibiotic resistance