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Table 1 List of Saccharomyces cerevisiae strains and plasmids used in this study and their genotypes

From: Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae

Strain

Genotype

Plasmid

Plasmid description

Source

BY4741

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0

None

 

John Duebera

sSD003

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd1 - 1 cit2 - 1

None

 

This study

sSD006

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd7 - 2

None

 

This study

sSD019

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd1 - 1 cit2 - 1 pdr5 - 1 ubp13 - 1 lsb6 - 1 nst1 - 1 cox1 - 1

None

 

This study

sSD021

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd7 - 2 sui2 - 2 pdr5 - 2 sey1 - 2

None

 

This study

sSD029

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd1Δ::KanMX4

pSD450

pAH056 CEN6/ARS4 URA3 gcd1-1

This study

sSD040

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd7Δ::His3

pSD469

pAH005 CEN6/ARS4 LEU2 gcd7-2

This study

sSD053

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd1Δ::KanMX4

pSD442

pAH056 CEN6/ARS4 URA3 GCD1

This study

sSD054

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 gcd7Δ::His3

pSD474

pAH005 CEN6/ARS4 LEU2 GCD7

This study

sSD055

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 sui2Δ::KanMX4

pSD444

pAH056 CEN6/ARS4 URA3 SUI2

This study

sSD056

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 sui2Δ::KanMX4

pSD452

pAH056 CEN6/ARS4 URA3 sui2-2

This study

sSD058

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 sui2Δ::KanMX4 gcd7Δ::His3

pSD452/pSD469

pAH056 CEN6/ARS4 URA3 sui2-2

pAH005 CEN6/ARS4 LEU2 gcd7-2

This study

sSD060

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 sui2Δ::KanMX4 gcd7Δ::His3

pSD444/pSD474

pAH056 CEN6/ARS4 URA3 SUI2

pAH005 CEN6/ARS4 LEU2 GCD7

This study

sSD061

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0

pSD442

pAH056 CEN6/ARS4 URA3 GCD1

This study

sSD062

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0

pSD450

pAH056 CEN6/ARS4 URA3 gcd1-1

This study

sSD063

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0

pSD444

pAH056 CEN6/ARS4 URA3 SUI2

This study

sSD064

MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0

pSD452

pAH056 CEN6/ARS4 URA3 sui2-2

This study

  1. Highlighted in bold are mutant alleles identified in the evolved strains
  2. aDept. of Bioengineering, University of California Berkeley