The primary transcriptome of the fast-growing cyanobacterium Synechococcus elongatus UTEX 2973

Table 1 List of top 20 abundant transcripts in S. elongatus UTEX 2973

Gene/sRNA	Type	Strand	Position	Product	Log₂-Fold change			Max condition^a
Gene/sRNA	Type	Strand	Position	Product	DK/CT	HL/CT	HT/CT	Max condition^a
M744_RS11628	gTSS	−	2,349,022	Hypothetical protein	7.30	− 2.48	3.80	DK
Sye_sRNA3	nTSS	+	1,471,309	ncRNA	4.62	− 5.21	1.27	DK
hspA	gTSS	+	788,507	Molecular chaperone	6.91	− 0.30	− 0.23	DK
ssrA	nTSS	+	2,274,728	tmRNA	4.03	− 0.21	− 0.06	DK
psaA	gTSS	+	1,138,200	Photosystem I P700 chlorophyll a apoprotein A1	− 0.62	− 2.23	0.09	HT
Sye_sRNA1	nTSS	+	1,559,116	sRNA	1.35	− 1.42	− 0.08	DK
gifA	gTSS	+	2,354,845	Glutamine synthetase inactivating factor IF7	6.41	− 1.82	− 0.68	DK
psbI	gTSS	−	1,491,583	Photosystem II reaction center protein I	− 1.56	0.58	0.68	HT
rpl10	gTSS	+	2,633,453	50S ribosomal protein L10	− 1.86	3.67	− 0.67	HL
rps21	gTSS	−	1,425,136	30S ribosomal protein S21	− 2.55	2.71	− 0.32	HL
psbE	gTSS	+	2,054,473	Cytochrome b559 subunit alpha	− 0.21	− 0.03	− 0.09	HT
sphX	gTSS	+	741,520	Protein SphX	− 4.07	2.01	− 1.15	HL
cp12	gTSS	+	319,690	Hypothetical protein	6.90	− 0.00	− 0.17	DK
rbp1	gTSS	−	2,585,082	RNA-binding protein	4.24	3.26	− 0.14	DK
M744_RS12900	gTSS	+	2,605,244	Hypothetical protein	4.47	− 2.25	0.59	DK
gltB	gTSS	−	2,367,947	Glutamate synthase subunit alpha (ferredoxin-GOGAT, Fd-GOGAT)	0.80	0.19	− 0.63	DK
M744_RS00180	gTSS	−	34,832	Hypothetical protein	− 2.95	− 3.64	− 0.25	CT
M744_RS05545	gTSS	+	1,062,162	Ribonuclease III	2.53	2.63	− 0.15	DK
somA	gTSS	+	1,561,830	Porin	0.05	2.63	− 0.52	HL
PsrR1	nTSS	+	11,213	sRNA	− 1.98	5.79	− 3.92	HL

All transcripts (except for rRNA) were sorted according to their normalized read counts
^aThe culture conditions under which the level of each transcript reached its maximum

ISSN: 2731-3654