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Table 1 List of investigated glycoside hydrolases of C. stercorarium

From: The hemicellulose-degrading enzyme system of the thermophilic bacterium Clostridium stercorarium: comparative characterisation and addition of new hemicellulolytic glycoside hydrolases

Accession number

Protein name

Modules

SP

Lit.

AGC67981.1

Bga2B

GH2

–

 

AGC67186.1

Bga2E

GH2

–

 

AGC67268.1

Bga2D

GH2

–

 

AGC67637.1

Bga2C

GH2

–

 

AGC68382.1

Uid2A

GH2

–

 

AGC67275.1

Bxl3B

GH3

–

[17]

AGC67337.1

Bgl3Z

GH3

–

[17]

AGC67350.1

–

GH3

–

 

AGC68204.1

–

GH3, CBM6

–

 

AGC68338.1

Nag3A

GH3

22 AA

 

AGC68873.1

Cel9Z

GH9, 2× CBM3, 2× CBMX2

27 AA

[19, 20]

AGC67515.1

Xyn10E

GH10

–

 

AGC67677.1

Xyn10C

GH10, CBM9, 2× CBM22

29 AA

[17, 25]

AGC67715.1

Xyn10B

GH10

34 AA

[17, 24]

AGC67759.1

Xyn10D

GH10

–

 

AGC68909.1

Xyn11A

GH11, 3× CBM6

30 AA

[17, 23]

AGC68130.1

Man26A

GH26, CBM35

26 AA

 

AGC68671.1

–

GH27

–

 

AGC67830.1

–

GH28

–

 

AGC67947.1

–

GH28

–

 

AGC67128.1

–

GH29

–

 

AGC68208.1

Bxl31D

GH31

–

 

AGC69232.1

Bga35A

GH35

–

 

AGC68033.1

–

GH38

–

 

AGC67890.1

Bxl39A

GH39

–

[17]

AGC67716.1

Axh43A

2× GH43, CBM6

29 AA

 

AGC67945.1

Arf43A

GH43

–

[17]

AGC68110.1

Arf43C

GH43

–

 

AGC68111.1

Abn43A

GH43

31 AA

 

AGC67521.1

Xyl43B

GH43

–

[28]

AGC67885.1

Xyl43A

GH43

–

[27]

AGC69509.1

Bxl43C

GH43

–

 

AGC67626.1

Arf51B

GH51

–

[17, 56]

AGC68692.1

Gal53A

GH53, 4× CBM61

33 AA

 

AGC69355.1

Agu67A

GH67

–

[30]

AGC68061.1

Ram78A

GH78

13 AA

[16, 31]

AGC69452.1

–

GH88

–

 

AGC67127.1

–

GH95

–

 

AGC68039.1

Xyn105F

GH105

–

 

AGC67892.1

–

GH105

–

 

AGC67946.1

–

GH105

–

 

AGC68044.1

–

GH105

–

 

AGC68046.1

–

GH105

–

 

AGC67967.1

–

GH115

25 AA

 

AGC67053.1

–

GH127

–

 

AGC67292.1

–

GH127

–

 

AGC67072.1

RamB

GHnc

–

 

AGC68062.1

BglA

GHnc

–

 

AGC69032.1

–

GHnc

–

 

AGC69275.1

ArfD

GHnc

–

 
  1. GenBank accession number, GH family, CBMs, and predicted signal peptide (SP) are listed; enzymes with proven activity are additionally listed with protein name. CBM modules were obtained from the CAZy and the Pfam database [8, 57, 58]. Literature (Lit.) to previously characterised enzymes is indicated. Signal peptides were predicted with the SignalP 4.1 server and a default cutoff value of 0.3 [42]. GHnc Non-classified glycoside hydrolases