Fig. 4

a Reconstructed metabolic pathways (KEGG) of S. quadricauda LWG002611. The pathways encoded by it are represented by green colour and not encoded are light grey in colour. b Reconstructed carbon fixation pathway showing the number of homologous genes found for the respective enzyme (number of the homologous gene given in the first bracket) in genome sequence of S. quadricauda LWG002611: PEP, phosphoenolpyruvate; OAA, oxaloacetate; MA, malic acid; Pyr, pyruvate; 3PGA, 3-phosphoglycerate; 1,3BPG, 1,3-bisphosphoglycerate; G3P, glyceraldehyde 3-phosphate; FBP, fructose 1,6-bisphosphatase; F6P, Fructose 6-phosphate; ERU4P, Erythrose 4-phosphate; SDP, Sedoheptulose-1,7-bisphosphatase; S7P, sedoheptulose 7-phosphate; R5P, ribose 5-phosphate; Ru5P, ribulose 5-phosphate; RuBP, ribulose-1,5-bisphosphate; enzymes (in red): PEPC, phosphoenolpyruvate carboxylase [EC:4.1.1.31]; MDH, malate dehydrogenase [EC:1.1.1.82]; PEPCK, Phosphoenolpyruvate carboxykinase [EC:4.1.1.49]; PPDK, pyruvate, orthophosphate dikinase [EC:2.7.9.1]; AST, aspartate aminotransferase [EC:2.6.1.1]; ALT, alanine transaminase [EC:2.6.1.2]; PGK, phosphoglycerate kinase [EC:2.7.2.3]; GAPDH, glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]; ALDO, fructose-bisphosphate aldolase, class I [EC:4.1.2.13]; FBP, fructose-1,6-bisphosphatase I [EC:3.1.3.11]; TKT, transketolase [EC:2.2.1.1]; SEBP, sedoheptulose-1,7-bisphosphatase [EC: 3.1.3.37], RpiA, ribose 5-phosphate isomerase A [EC:5.3.1.6]; PRK, phosphoribulokinase [EC:2.7.1.19]; TPI, triosephosphate isomerase [EC:5.3.1.1]; Xfp, xylulose-5-phosphate [EC:4.1.2.9]; RPE, ribulose-phosphate 3-epimerase [EC:5.1.3.1]; CA, carbonic anhydrase [EC 4.2.1.1]; dn, de novo; ref, reference guided. c Reconstructed fatty acids and triacylglycerols (TAG) biosynthesis pathway showing the homologous gene found for the respective enzyme (number of the homologous gene given in the first bracket) in genome sequence of S. quadricauda LWG002611: FFA, free fatty acid; LPA, lysophosphatidic acid; PA, phosphatidic acid; DAG, diacylglycerol; TAG, triacylglycerol; ACP, acyl carrier protein; CoA, coenzyme A; enzymes (in red): PDH, pyruvate dehydrogenase complex [EC 1.2.4.1]; ACC, acetyl-CoA carboxylase [EC 6.4.1.2]; MAT, malonyl-CoA:ACP transacylase [EC 2.3.1.39]; KAS, β-ketoacyl-ACP synthase [EC 2.3.1.41]; KAR, β-ketoacyl-ACP reductase [EC 1.1.1.100]; HD, 3-hydroxyacyl-ACP dehydratase [EC 4.2.1.59]; ENR, enoyl-ACP reductase [EC 1.3.1.9]; FAT, fatty acyl-ACP thioesterase [EC 3.1.2.14]; G3PDH, gycerol-3-phosphate dehydrogenase [EC 1.1.1.8]; GPAT, glycerol-3-phosphate acyltransferase [EC 2.3.1.15]; LPAAT, lyso-phosphatidic acid acyltransferase [EC 2.3.1.51]; DAGK Diacylglycerol kinase [2.7.1.107]; PAP, Phosphatidic acid phosphatase [EC 3.1.3.4]; PDAT, phospholipid:diacylglycerol acyltransferase [EC 2.3.1.158]; DGAT, diacylglycerol acyltransferase [EC 2.3.1.20]; dn, de novo; ref, reference guided