Fig. 6

Alignment and comparison of the twisted platform binding sites. CcCBM17-RE and CjCBM28-NRE aligned with respect to the common pair of Trp residues (dark blue sticks) (top). The common naming of binding subsites used in this study (letters) is given between the alignment of the binding sites, and the original nomenclature (numbers) is given above and below the cartoon representations in the top panel. Average total interaction energy of the pyranose rings with the surrounding amino acid residues, on a per-subsite-basis, of CcCBM17-RE and CjCBM28-NRE calculated from the 250-ns trajectory (bottom). Error bars represent 1 standard deviation