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Table 2 Primers used in this study

From: Biological conversion of methane to putrescine using genome-scale model-guided metabolic engineering of a methanotrophic bacterium Methylomicrobium alcaliphilum 20Z

Primers

Primer sequence 5′ → 3′

pAWP89-ptac-For

TAGTTGTCGGGAAGATGCGT

pAWP89-ptac-Rev

AGCTGTTTCCTGTGTGAATA

FWD_speCEc

cacacaggaaacagctATGAAATCAATGAATATTGCC

REV_speCEc

gtgaatacctTTACTTCAACACATAACCGT

FWD_potE

tgttgaagtaaAGGTATTCACACAGGAAACAGCTATGAGTCAGGCTAAATCGA

REV_potE

gcatcttcccgacaactaTTAACCGTGTTTATTTTTCAGT

FWD_speCOb

ttcacacaggaaacagctATGACCGATCGTATCCGCGAA

REV_speCOb

gcatcttcccgacaacta TCAGATCACGAAGGATTCGAG

FWD_speE F1

tggtctgacagttaccaGCCGGAAATGATGAAGTCCA

REV_speE F1

gggatttctTGCGCATTAGTTATCGAGGAG

FWD_speE F2

taatgcgcaAGAAATCCCTGCAGTGTTGA

REV_speE F2

ccgacaacctgcacatTTCGTTTAAGGTCTGTGCGA

FWD_433speEc

TGTTGCCTTGTGCCGACAT

REV_433speEc

ACCAACACCGGTAACGATAG

FWD_argD

aggtattcacacaggaaacagctATGACCGGCCACATTATGC

REV_argD

tgaatacctCTAGGGTTCATTGGCTTGATG

FWD_argJ

tgaaccctagAGGTATTCACACAGGAAACAGCTATGGCGGTGGGGCAGGT

REV_argJ

gcatcttcccgacaactaCTAAGTCCGATACTCCGCAT

FWD_pTac-argDJ

atgtgcttcTCACATGTTCTTTCCTGCGT

REV_pTac-argDJ

atgctatacgaagttatgcTCGAACTTTTGCTGAGTGGA

FWD_351argDJ_F1

acctgacgtctagatctgCGGCTACAACGTTCTGAAAG

REV_351argDJ_F1

gaagcacatGAAGCACATTCGAGCCTGAA

FWD_351argDJ_F2

gtgttaaccggtgagctTGTTTCAGGATGTCGCTTGG

REV_351argDJ_F2

ggatcctctagtgagctATGTTTAAAAGCTTCGCGGC

FWD_351c

CATGACTTCATGAACGATGA

REV_351c

TCCGACCAATAATCGTAATG

  1. Homologous sequences for Gibson assembly are in lowercase; ribosome binding sites are in bold