|
CAZy familya
| |
# of genes in 2T2.1b
|
Mean # of genes in Lecythophora/Coniochaeta (SD)c
|
Mean # of genes in other fungal genomes (SD)d
|
|---|
|
CBM24
| |
22
|
X
|
3.7 (3.4)
|
|
GH43
|
H
|
22
|
17.5 (1.5)
|
X
|
|
GH16
|
H
|
20
|
17.0 (0.7)
|
X
|
|
AA3_2
| |
19
|
10 (0.7)
|
X
|
|
GH76
| |
15
|
10.25 (0.4)
|
7.0 (3.7)
|
|
CE1
|
H
|
13
|
8.5 (0.8)
|
4.5 (3.7)
|
|
GH47
| |
13
|
X
|
7.1 (1.9)
|
|
GH31
|
S
|
12
|
X
|
6 (1.8)
|
|
GH71
|
S
|
11
|
X
|
4.2 (1.5)
|
|
AA8
| |
10
|
X
|
3.6 (2.2)
|
|
GH55
| |
10
|
X
|
4.7 (2.6)
|
|
AA3
| |
8
|
4.25 (0.4)
|
2.1 (2.4)
|
|
CE3
|
H
|
8
|
5 (1.2)
|
X
|
|
GH11
|
H
|
8
|
5.75 (0.4)
|
2.9 (2.3)
|
|
AA4
|
L
|
7
|
3.75 (0.4)
|
1.2 (1.5)
|
|
GH32
| |
7
|
4.5 (0.5)
|
X
|
|
GH78
| |
7
|
3.75 (0.8)
|
X
|
|
GH7
|
H
|
6
|
8.5 (0.5)
|
X
|
|
AA1_2
|
L
|
5
|
4 (0)
|
1.5 (1)
|
|
AA12
| |
5
|
X
|
1.8 (1.3)
|
|
AA3_3
| |
5
|
3 (0.7)
|
1.6 (0.9)
|
|
GH13_40
|
S
|
5
|
X
|
2.4 (1.2)
|
|
GH45
|
H
|
5
|
X
|
1.2 (0.8)
|
|
GH5_5
| |
5
|
X
|
2 (1)
|
|
CE15
|
H
|
4
|
X
|
1 (1)
|
|
GH128
|
H
|
4
|
5.5 (0.5)
|
X
|
|
GH88
| |
4
|
1.5 (0.5)
|
0.8 (1.1)
|
|
AA7_dist
| |
3
|
1 (0)
|
X
|
|
CBM35
|
H
|
3
|
4 (0)
|
X
|
|
CBM52
|
H
|
3
|
X
|
0.4 (0.6)
|
|
GH127
|
H
|
3
|
X
|
0.4 (0.6)
|
|
GH39
|
H
|
3
|
0
|
0.5 (1.2)
|
|
GH5_7
| |
3
|
4 (0)
|
X
|
|
AA2_dist
| |
2
|
X
|
0.4 (0.4)
|
|
CE16
|
H
|
2
|
4 (0)
|
X
|
|
GH1
|
H
|
2
|
3 (0)
|
X
|
|
GH114
| |
2
|
1 (0)
|
X
|
|
GH13
|
S
|
2
|
1 (0)
|
0.1 (0.3)
|
|
GH130
| |
2
|
0.5 (0.5)
|
0.1 (0.3)
|
|
PL4_1
| |
2
|
X
|
0.7 (0.6)
|
- SD standard deviation, X represented families from 2T2.1 where we not found two standard deviations above or below of the mean counts, H predicted (hemi)cellulose-degrading enzymes, L predicted lignin-degrading enzymes, S predicted starch-degrading enzymes
- aOnly AA, GH, CBM, CE, and PL
- bGenes with more than two copies after remove duplicated content
- cFungal genomes form C. ligniaria CBS111746, C. ligniaria NRRL30616, Coniochaeta sp. PMI546, and Lecythophora sp. AK0013
- dFungal genomes Trire2, Neucr_trp3_1, Fusoxy1, Spoth2, Podans1, Aspacri1, Penex1, Acrchr1, Phchr2, and Triol1 (see Additional file 1: Table S1)
