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Table 3 Log2 FC and normalized expression values (FPKM) of the significantly and highly expressed proteins from CAZy family AA9 (LPMOs) in WS and PTWS compared with Glu

From: Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery

JGI-IDs

Log2 FC (WS vs Glu)

Log2 FC (PTWS vs Glu)

FPKM_WS/FPKM_Glu

FPKM_PTWS/FPKM_Glu

1170506a

9.9

9.4

4980

3189

1175568a

9.9

7.7

4670

1019

1179874

8.3

6.4

538

135

1216758

8.2

9

23.47b

39.48 f

1220247ac

9

7.1

786

199

1230134

8.5

5.6

966

116

1231383

7.1

8.2

7.43b

16.44 f

1232676a

9.1

5.6

1046

87

1245155c

8

5.7

360

75

510059c

8.5

6.8

535

164

980755a

10

8.4

102.06b

33.52 f

980894c

8.5

6.6

577

148

  1. aAre the top-five upregulated proteins in WS and PTWS compared with Glu
  2. bProteins that showed values equal to zero in glucose. Here, we showed the FPMK average values in WS or PTWS
  3. cLPMOs with CBM1 domains