Fig. 2
From: A transcriptional response of Clostridium beijerinckii NRRL B-598 to a butanol shock
Overall comparison of RNA-Seq samples. 2D representation of the normalized expression data after dimensionality reduction by t-SNE. a Comparison of the samples collected at the six time-points (Tb0–Tb5) coded by different colors. Each point represents a sample with a text label indicating the biological replicate (F, G) and the time-point from which it originated (Tb0–Tb5). b Comparison of the samples collected during butanol shock cultivation (red) and the samples from our previous studies [17, 18] during standard cultivation (blue). Again, points represent samples with a text labels indicating biological replicates (B, C, D, and E for standard cultivation and F and G for butanol shock). Samples F1 and G1 collected before butanol addition at time-point Tb0 = 6 h correspond to samples B2, C2, D2, and E2 collected at T2 = 6 h during standard cultivation