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Table 4 Genes in strain ORCB002 which exhibit increased expression when cells were cultured in elevated osmolarity conditions

From: Gene targets for engineering osmotolerance in Caldicellulosiruptor bescii

Locus tag

Annotation

log2(ORCB002/JWCB005)

Glycerol

Glucose

NaCl

B5X54_RS01265

1-Phosphofructokinase

4.2

0.8

4.5

B5X54_RS01270

PTS fructose transporter subunit IIA

4.5

0.7

4.5

B5X54_RS01275

PTS fructose transporter subunit IIBC

4.8

0.6

4.3

B5X54_RS01280

HPr family phosphocarrier protein

4.1

0.8

3.7

B5X54_RS01285

Phosphoenolpyruvate-protein phosphotransferase

4.5

0.6

4.0

B5X54_RS01290

Acetylesterase

2.4

0.4

2.7

B5X54_RS04520

Transposase

1.4

1.8

0.6

B5X54_RS04525

Sporulation sigma factor SigE

1.5

1.4

0.9

B5X54_RS04530

Sporulation sigma factor SigG

1.3

1.2

1.0

  1. Bold and italics denote adjacent genes which may be co-expressed as part of the same transcriptional unit. Bold text denotes statistical significance (Wald test, Benjamini–Hochberg adjusted p value < 0.05, n = 3). Values that are not statistically significant are denoted in underline