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Table 4 Comparison of PRM and TMT quantification results

From: Integrative transcriptome and proteome analyses provide new insights into different stages of Akebia trifoliata fruit cracking during ripening

Accession Protein description Gene name PM_PS ratio PL_PM ratio
PRM TMT PRM TMT
TRINITY_DN143250_c1_g6 Pectate lyase PL 43.325 1.392 2.029 #N/A
TRINITY_DN143028_c0_g1 Pectinesterase PE 1.470 0 1.695 1.293
TRINITY_DN142943_c1_g1 Polygalacturonase PG2 0.799 0.566 0.993 #N/A
TRINITY_DN142424_c1_g1 Furostanol glycoside 26-
O-beta-glucosidase
F26G 4.390 1.853 1.185 1.301
TRINITY_DN142386_c5_g1 Beta-galactosidase β-GAL2 1.620 0 1.071 1.394
TRINITY_DN142336_c1_g1 Peroxidase PRX 1.303 0.594 0.707 1.304
TRINITY_DN142120_c0_g1 Auxin efflux carrier AEC 2.593 1.245 0.535 0
TRINITY_DN142119_c1_g3 Beta-fructofuranosidase β-FRU 1.497 0.655 0.500 0
TRINITY_DN141662_c1_g4 Alpha/beta hydrolase α-HY 3.192 1.243 0.306 0
TRINITY_DN141432_c1_g2 Beta-D-xylosidase XYL 1.717 0 0.606 1.398
TRINITY_DN141264_c1_g1 Peroxidase N1 PRX2 0.828 0.619 1.651 0
TRINITY_DN141074_c0_g1 Polygalacturonase PG4 1.620 1.464 0.680 0
TRINITY_DN139660_c0_g1 Peroxidase 53 PRX5 0.703 0.644 1.239 0
TRINITY_DN139379_c0_g3 Cationic peroxidase 1 PRX3 0.421 0.546 1.208 0
TRINITY_DN137437_c3_g1 Beta-glucosidase 33 BGLU33 1.291 0.636 0.317 0
TRINITY_DN137338_c1_g4 Endoglucanase 19 ENDOG19 15.470 1.502 0.232 0
TRINITY_DN136333_c1_g2 Endoglucanase 8 ENDOG8 3.207 1.220 0.696 0
TRINITY_DN135837_c0_g4 Dirigent-like protein DIR1 0.733 0.597 0.927 0