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Table 2 Thirty-eight differentially expressed genes highlighted in our analysis were involved in 19 reactions in the starch and sucrose metabolism and associated glycolysis reactions

From: Differential expression of starch and sucrose metabolic genes linked to varying biomass yield in Miscanthus hybrids

GENE Protein name Enzyme name Enzyme codE ATH Rice Leaf FC Stem FC TF
Misin01G145100 BG8 Glucan endo-1,3-beta-D-glucosidase 1G64760 03g45390   2.22 11G251200
Misin01G337100 Beta-1,3-glucanase Glucan endo-1,3-beta-D-glucosidase   03g25790 2.41   04G316000
Misin01G358800 SUS3 Sucrose synthase 4G02280 03g22120   1.98  
Misin02G115300 T11I18 Glucan endo-1,3-beta-D-glucosidase 3G04010 03g45390   1.99 12G221200
Misin02G205400 BAM1 Beta-amylase 3G23920 10g32810 2.36 2.37  
Misin02G326400 Beta-1,3-glucanase Glucan endo-1,3-beta-D-glucosidase   03g25790 2.53   05G228900
Misin02G341300 Phosphoglycerate mutase Phosphoglycerate mutase   03g21260 2.45 4.35  
Misin03G195400 ISA3 Isoamylase 4G09020 09g29404 1.36 03G244700
Misin03G235900 TIM Triose-phosphate isomerase 2G21170 09g36450   − 0.59  
Misin03G316100 HEXO2 Beta-N-acetylhexosaminidase 1G05590 07g38790 3.91   
Misin04G207500 AMY1 Alpha-amylase 4G25000   1.67   
Misin04G215400 ISA3 Isoamylase 4G09020 09g29404   1.07 04G236800
Misin04G312400   Beta-amylase     5.04 02G101700
Misin05G335800 PHS2 Glycogen phosphorylase 3G46970 01g63270   1.07  
Misin06G202700 F15G16.1/SF10 Glucose-6-phosphate 1-epimerase 3G61610 01g46950 − 1.67   TF regulating 48 target genes
Misin06G358300 BGLU42/4 Beta-glucosidase 5G36890 01g67220 1.27   T131300
Misin07G322000 LSF1/SEX4 Isoamylase 3G01510 08g29160 − 1.02  
Misin07G352300 SBE2.2 1,4-Alpha-glucan branching enzyme 5G03650 02g32660   1.92 05G273100
Misin10G070300 SPS5 Sucrose-phosphate synthase   11g12810   1.1 03G157300
Misin11G067200 cwINV4/OsCIN2 Beta-fructofuranosidase 2G36190 04g33740   3.63 06G000800
Misin11G111200 BGLU14 Beta-glucosidase 2G25630   − 1.26   
Misin11G121200 MLS Malate synthase 5G03860 04g40990 5.07 5.71 12G063100
Misin11G141900 BGLU45/18 Beta-glucosidase 1G61810 04g43410 − 1.58   
Misin11G142000* BGLU18 Beta-glucosidase   04g43410   1.21  
Misin12G113600 PFK2 6-Phosphofructokinase 5G47810 09g30240 − 6.94 − 6.65 01G471000
Misin12G147300 BGLU46 Beta-glucosidase 1G61820 04g43390   1.12  
Misin15G034600   Beta-amylase     1.09 04G230700
Misin16G118700 BG1 Glucan endo-1,3-beta-D-glucosidase 3G57270   − 3.26   
Misin17G123500 BG3 Glucan endo-1,3-beta-D-glucosidase 3G57240   − 2.79   
Misin17G131000 DBE1 Isoamylase 1G03310 05g32710   1.04 09G177000
Misin17G142700 HEXO3 Beta-N-acetylhexosaminidase 1G65590 05g34320   − 0.57 03G257000
Misin17G216100 ALDH12A1 L-Glutamate gamma-semialdehyde dehydrogenase 5G62530   4.19 4.17 TF regulating five genes
Misin17G255500 AGPL3/APL3 Glucose-1-phosphate adenylyltransferase   05g50380   1.72  
Misin18G276400 Glycogen branching 1,4-Alpha-glucan branching enzyme     1.77  
Misin19G100900 SS2 Starch synthase   06g12450   2.44  
MisinT226600 BGL2 Glucan endo-1,3-beta-D-glucosidase 3G57260   2.45 4.22  
MisinT393000 SS3 Starch synthase 1G11720    1.63 T178900
MisinT552400 BAM1 Beta-amylase 3G23920 10g32810   3.03 T178900
  1. Leaf/stem FC = Log2 fold-change expression “high NSC”/“Low NSC” hybrids in either lead or stem tissues; ATH/RICE = Homologous protein in Arabidopsis thaliana and rice (The prefixes “AT” or “LOC_Os” were excluded from the gene name). TF, Transcription factor regulating the gene, only TFs that were DE or which regulon was enriched in DE-targets are shown. The prefix “Misin” was excluded from the TF gene name