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Table 3 Additional carbohydrate and secondary metabolic enzymatic proteins highlighted in our differentially expression analysis between “high NSC” and “low NSC” Miscanthus hybrids

From: Differential expression of starch and sucrose metabolic genes linked to varying biomass yield in Miscanthus hybrids

Gene

Enzyme name

Enzyme code

Leaf FC

stem FC

TF

Misin01G047600

Ent-copalyl diphosphate synthase

5.5.1.13

2.51

  

Misin01G158200

Ent-isokaurene C2/C3-hydroxylase

1.14.13.143/14.112

1.83

 

Misin01G349900

Indolin-2-one monooxygenase

1.14.13.138/14.157

− 4.68

  

Misin01G390800

Mitogen-activated protein kinase

2.7.11.24

 

1.77

 

Misin02G286600

Glutathione transferase

2.5.1.18

 

2.01

Misin02G101700

Misin02G293100

Glutathione transferase

2.5.1.18

 

4.15

Misin05G170700

Misin07G012200

Misin12G063100

Misin15G053900

Misin02G490600

Fucose-1-phosphate guanylyltransferase

2.7.7.30

1.84

2.9

 

Misin03G233500

Beta-galactosidase

3.2.1.23

− 1.03

  

Misin04G105800

Camalexin synthase

1.14.19.52

1.58

  

Misin04G200300

Aldehyde dehydrogenase (NAD( +))

1.2.1.3

0.81

  

Misin04G333300

Dimethylallyltranstransferase

2.5.1.1

− 1.4

 

Misin01G452600

Misin15G053900

It regulates 29 targets

Misin05G078900

Endo-1,4-beta-xylanase

3.2.1.8

− 2.78

  

Misin05G312600

Trans-cinnamate 4-monooxygenase

1.14.14.91

− 2.11

  

Misin06G200500

Pyruvate kinase

2.7.1.40

0.64

  

Misin06G334400

Laccase

1.10.3.2

− 2.4

  

Misin07G204200

Indolin-2-one monooxygenase

1.14.13.138/14.157

5.73

  

Misin07G251100

6-phosphogluconolactonase

3.1.1.31

− 2.48

  

Misin07G271500

Malate dehydrogenase (NADP( +))

1.1.1.82

− 3.12

− 0.85

Misin01G049500

Misin01G452600

Misin03G016900

Misin03G365800

Misin06G000800

Misin07G160300

Misin08G144100

Glycerophosphodiester phosphodiesterase

3.1.4.46

0.82

  

Misin09G192700

Indolin-2-one monooxygenase

1.14.13.138/14.157

3.53

  

Misin10G020200

2-carboxy-D-arabinitol-1-phosphatase

3.1.3.63

− 3.42

− 2.49

Misin01G019100

Misin01G049500

Misin06G000800

Misin07G160300

Misin10G067800

Non-reducing end alpha-L-arabinofuranosidase

3.2.1.55

− 1.95

 

Misin12G092100

Misin10G086500

Sugar-phosphatase

3.1.3.23

− 1.67

 

Misin07G251400.1

Misin11G031500

Nicotinamide N-methyltransferase

2.2.1.1

 

2.33

 

Misin12G095900

Sinapoylglucose–malate O-sinapoyltransferase

2.3.1.92

2.55

3.49

 

Misin15G165600

Ent-cassa-12,15-diene 11-hydroxylase

1.14.13.145/14.112

5.04

5.67

Misin05G245900

Misin08G171900

MisinT078100

Misin18G109800

Pyruvate dehydrogenase

1.2.4.1

 

4.21

TF regulating two genes

Misin19G207900

Indole-2-monooxygenase

1.14.14.153

1.52

  

MisinT014600

3-hydroxyindolin-2-one monooxygenase

1.14.13.139/14.139

10.87

8.05

MisinT099300

MisinT014900

Indole-2-monooxygenase

1.14.14.153

11.4

5.99

MisinT099300

MisinT029700

Delta(24)-sterol reductase

1.3.1.72

2.52

1.5

Misin05G264600

MisinT167900

Alpha-galactosidase

3.2.1.22

 

0.81

 

MisinT219600

Indolin-2-one monooxygenase

1.14.13.138/14.157

2.22

4.73

 

MisinT258000

Glutathione transferase

2.5.1.18

2.57

1.55

 

MisinT404400

Glutathione transferase

2.5.1.18

2.51

3.37

 
  1. Leaf FC or Stem FC = Log2 fold-change expression between “high NSC”/ “Low NSC” hybrids in either leaf or stem tissues. TF, Transcription factor regulating the gene, only TFs that were DE or which regulon was enriched in DE targets are shown