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Table 3 Additional carbohydrate and secondary metabolic enzymatic proteins highlighted in our differentially expression analysis between “high NSC” and “low NSC” Miscanthus hybrids

From: Differential expression of starch and sucrose metabolic genes linked to varying biomass yield in Miscanthus hybrids

Gene Enzyme name Enzyme code Leaf FC stem FC TF
Misin01G047600 Ent-copalyl diphosphate synthase 5.5.1.13 2.51   
Misin01G158200 Ent-isokaurene C2/C3-hydroxylase 1.14.13.143/14.112 1.83  
Misin01G349900 Indolin-2-one monooxygenase 1.14.13.138/14.157 − 4.68   
Misin01G390800 Mitogen-activated protein kinase 2.7.11.24   1.77  
Misin02G286600 Glutathione transferase 2.5.1.18   2.01 Misin02G101700
Misin02G293100 Glutathione transferase 2.5.1.18   4.15 Misin05G170700
Misin07G012200
Misin12G063100
Misin15G053900
Misin02G490600 Fucose-1-phosphate guanylyltransferase 2.7.7.30 1.84 2.9  
Misin03G233500 Beta-galactosidase 3.2.1.23 − 1.03   
Misin04G105800 Camalexin synthase 1.14.19.52 1.58   
Misin04G200300 Aldehyde dehydrogenase (NAD( +)) 1.2.1.3 0.81   
Misin04G333300 Dimethylallyltranstransferase 2.5.1.1 − 1.4   Misin01G452600
Misin15G053900
It regulates 29 targets
Misin05G078900 Endo-1,4-beta-xylanase 3.2.1.8 − 2.78   
Misin05G312600 Trans-cinnamate 4-monooxygenase 1.14.14.91 − 2.11   
Misin06G200500 Pyruvate kinase 2.7.1.40 0.64   
Misin06G334400 Laccase 1.10.3.2 − 2.4   
Misin07G204200 Indolin-2-one monooxygenase 1.14.13.138/14.157 5.73   
Misin07G251100 6-phosphogluconolactonase 3.1.1.31 − 2.48   
Misin07G271500 Malate dehydrogenase (NADP( +)) 1.1.1.82 − 3.12 − 0.85 Misin01G049500
Misin01G452600
Misin03G016900
Misin03G365800
Misin06G000800
Misin07G160300
Misin08G144100 Glycerophosphodiester phosphodiesterase 3.1.4.46 0.82   
Misin09G192700 Indolin-2-one monooxygenase 1.14.13.138/14.157 3.53   
Misin10G020200 2-carboxy-D-arabinitol-1-phosphatase 3.1.3.63 − 3.42 − 2.49 Misin01G019100
Misin01G049500
Misin06G000800
Misin07G160300
Misin10G067800 Non-reducing end alpha-L-arabinofuranosidase 3.2.1.55 − 1.95   Misin12G092100
Misin10G086500 Sugar-phosphatase 3.1.3.23 − 1.67   Misin07G251400.1
Misin11G031500 Nicotinamide N-methyltransferase 2.2.1.1   2.33  
Misin12G095900 Sinapoylglucose–malate O-sinapoyltransferase 2.3.1.92 2.55 3.49  
Misin15G165600 Ent-cassa-12,15-diene 11-hydroxylase 1.14.13.145/14.112 5.04 5.67 Misin05G245900
Misin08G171900
MisinT078100
Misin18G109800 Pyruvate dehydrogenase 1.2.4.1   4.21 TF regulating two genes
Misin19G207900 Indole-2-monooxygenase 1.14.14.153 1.52   
MisinT014600 3-hydroxyindolin-2-one monooxygenase 1.14.13.139/14.139 10.87 8.05 MisinT099300
MisinT014900 Indole-2-monooxygenase 1.14.14.153 11.4 5.99 MisinT099300
MisinT029700 Delta(24)-sterol reductase 1.3.1.72 2.52 1.5 Misin05G264600
MisinT167900 Alpha-galactosidase 3.2.1.22   0.81  
MisinT219600 Indolin-2-one monooxygenase 1.14.13.138/14.157 2.22 4.73  
MisinT258000 Glutathione transferase 2.5.1.18 2.57 1.55  
MisinT404400 Glutathione transferase 2.5.1.18 2.51 3.37  
  1. Leaf FC or Stem FC = Log2 fold-change expression between “high NSC”/ “Low NSC” hybrids in either leaf or stem tissues. TF, Transcription factor regulating the gene, only TFs that were DE or which regulon was enriched in DE targets are shown