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Table 1 Effect of CRISPR interference of the selected ATP-consuming enzyme-encoding genes on 4HPAA production in E. coli 4HPAA-2

From: ATP and NADPH engineering of Escherichia coli to improve the production of 4-hydroxyphenylacetic acid using CRISPRi

Gene

Description

Ratio*

purC

Phosphoribosylaminoimidazole-succinocarboxamide synthase. It catalyzes the reaction: ATP + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate → ADP + 5′-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole + phosphate + H+

1.38 ± 0.02

araH

Arabinose ABC transporter membrane subunit

1.36 ± 0.04

yeaG

Protein kinase

1.35 ± 0.03

sucC

Succinyl-CoA synthetase subunit β. It catalyzes the reaction: succinate + ATP + coenzyme A ↔ succinyl-CoA + ADP + phosphate

1.34 ± 0.01

dppD

Dipeptide ABC transporter ATP-binding subunit

1.33 ± 0.02

artP

L-Arginine ABC transporter ATP-binding subunit

1.33 ± 0.02

fecE

ferric citrate ABC transporter ATP-binding subunit

1.33 ± 0.03

artM

L-Arginine ABC transporter membrane subunit

1.30 ± 0.02

argB

Acetylglutamate kinase. It catalyzes the reaction: N-acetyl-L-glutamate + ATP → N-acetylglutamyl-phosphate + ADP

1.30 ± 0.02

mgtA

Mg2+ importing P-type ATPase

1.24 ± 0.02

aas

Acyltransferase. It has long-chain fatty acid-CoA/long-chain fatty acid [acyl-carrier-protein] ligase activity

1.22 ± 0.03

sapF

Putrescine ABC exporter ATP-binding protein

1.21 ± 0.02

nanK

N-Acetylmannosamine kinase. It catalyzes the reaction: N-acetyl-D-mannosamine + ATP → N-acetyl-D-mannosamine 6-phosphate + ADP + H+

1.20 ± 0.03

phnN

Ribose 1,5-bisphosphate phosphokinase, It catalyzes the reaction: α-D-ribose 1,5-bisphosphate + ATP ↔ 5-phospho-α-D-ribose 1-diphosphate + ADP

1.18 ± 0.02

pfkA

6-Phosphofructokinase 1. It catalyzes the reaction: β-D-fructofuranose 6-phosphate + ATP → ADP + β-D-fructose 1,6-bisphosphate + H+

1.18 ± 0.02

ssuC

Aliphatic sulfonates transport permease protein

1.17 ± 0.02

atpG

ATP synthase F1 complex subunit γ

1.15 ± 0.01

copA

Soluble Cu+ chaperone

1.11 ± 0.01

hisP

Histidine/lysine/arginine/ornithine transport ATP-binding protein

1.09 ± 0.03

  1. The data represent the means of three replicates, and error bars represent standard deviations