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Table 1 List of lignocellulosic biomass-degrading microbe’s secretome analysed

From: Harnessing microbial wealth for lignocellulose biomass valorization through secretomics: a review

Fungi Substrate and culture conditions Proteomic analysis Distribution of GHs in the secretome of lignocellulolytic fungi References
Doratomyces stemonitis C8 Avicel cellulose (1.5%), 250 rpm, 7 days, 28 °C 2D-PAGE, LC–MS/MS GH3 (N = 4), GH5 (N = 4), GH7 (N = 3), GH10 (N = 2), GH43 (N = 2), GH62, GH74, GH78 [206]
A. fumigatus AF293 Sugarcane bagasse (1%), 37 °C, 24 h SDS-PAGE
LC–MS/MS
GH1, GH2, GH3, GH6, GH7 (N = 3), GH10 (N = 2), GH11 (N = 2), GH13, GH131, GH15, GH16 (N = 5), GH17 (N = 2), GH18 (N = 4), GH25, GH27(N = 2), GH28, GH30, GH43 (N = 6), GH47 (N = 2), GH5 (N = 7), GH53, GH55, GH62 (N-2), GH65, GH71, GH72 (N = 2), GH76, GH81, GH92, GH93 [154]
A. fumigatus Z5 Rice straw (1%), 50 °C, 170 rpm, 7 days iTRAQ
LC–MS/MS
GH3 (N = 2), GH5, GH6, GH7 (N = 2), GH10 (N = 3), GH11 (N = 2), GH12, GH15, GH16, GH17, GH18 (N = 4), GH27, GH30, GH43 (N = 3), GH47, GH61(N = 2), GH62 [152]
Fusarium verticillioides Wheat straw, 30 °C, 110 rpm 7 days 1D-PAGE
LC–MS/MS
GH1, GH3 (N = 6), GH5 (N = 2), GH7, GH10 (N = 4), GH11, GH13, GH15 (N = 2), GH16, GH27 (N = 3), GH28 (N = 2), GH29 (N = 2), GH30, GH31, GH32, GH39, GH43 (N = 8), GH51, GH54, GH61 (N = 2), GH62, GH67, GH76, GH79, GH88, GH93 (N = 2) [207]
T. reesei Rut-C30 Sugarcane bagasse (1%), 30 °C, 200 rpm,
72 h
LC–MS/MS GH1 (N = 2), GH2 (N = 2), GH3 (N = 2), GH5 (N = 3), GH6, GH7, GH10 (N = 2), GH11(N = 3), GH12, GH15, GH16 (N = 3), GH17 (N = 3), GH18 (N = 2),GH20, GH28 (N = 2), GH31, GH43 (N = 5), GH47 (N = 2), GH55, GH57, GH61(N = 2), GH67, GH71(N = 4), GH72 (N = 2), GH74 (N = 2), GH75, GH92 (N = 2) [208]
T. reesei Rut-C30 Sugarcane bagasse (1%), 30 °C, static for 24 h, 30 °C, 200 rpm, 48 h LC–MS/MS GH2, GH3, GH5, GH6, GH7, GH10 (N = 2), GH11(N = 4), GH12, GH15, GH16, GH18 (N = 2), GH31, GH38, GH47 (N = 2), GH57, GH61, GH67 (N = 2), GH71 (N = 2), GH74, GH75, GH92 [208]
T. reesei Rut-C30 Sugarcane bagasse, 0 °C, 3 days 1D-PAGE
LC–MS/MS
GH1 (N = 2), GH2, GH3 (N = 5), GH5 (N = 2), GH6 (N = 2), GH7 (N = 2), GH11 (N = 3), GH20, GH25, GH27 (N = 2), GH28, GH30, GH31, GH35, GH36,GH37, GH54 (N = 2), GH55, GH61 (N = 2), GH62, GH67, GH72 (N = 2), GH74, GH92 [53]
Trichoderma asperellum S4F8 Sugarcane bagasse, 30 °C, 3 days 1D-PAGE
LC–MS/MS
GH1 (N = 2), GH2, GH3 (N = 6), GH5 (N = 5), GH6, GH7 (N = 2), GH10, GH11(N = 4), GH12, GH15 (N = 2), GH16 (N = 2), GH17, GH18 (N = 3), GH20, GH25, GH27 (N = 2), GH28 (N = 2), GH31 (N = 2), GH35, GH36, GH43, GH47, GH54 (N = 2), GH55, GH62 (N = 2), GH67, GH72 (N = 3), GH74, GH79, GH92 (N = 3), GH93, GH95 [53]
A. niger A12 Sugarcane bagasse (1%), 32 °C, 200 rpm, 72 h LC–MS/MS GH2, GH3 (N = 2), GH5, GH7, GH11(N = 2), GH12, GH15, GH16, GH18, GH20, GH31 (N = 2), GH32, GH35, GH38 (N = 2), GH43, GH47, GH62 (N = 2), GH64, GH72 (N = 2) [208]
A. niger A12 Sugarcane bagasse (1%),, 32 °C, static for 24 h, 32 °C, 200 rpm, 48 h LC–MS/MS GH2 (N = 2), GH3 (N = 4), GH5, GH7, GH11(N = 3), GH12(N = 3), GH15, GH16, GH31 (N = 2), GH32, GH35, GH43 (N = 2), GH47, GH62 (N = 2), GH64, GH72 (N = 3) [208]
A. nidulans strain FGSCA4 Wheat starch (1%), 30 °C, 150 rpm, 5 days LC–MS/MS GH1, GH2, GH3 (N = 5), GH5, GH6, GH7, GH10, GH11, GH13 (N = 13), GH15, GH16 (N = 6), GH17 (N = 2), GH20 (N = 2), GH25 (N = 3),GH27 (N = 2), GH28, GH31 (N = 3), GH36, GH43 (N = 4), GH47, GH53, GH54, GH55 (N = 2),GH62, GH63, GH65, GH71 (N = 2), GH72 (N = 3), GH74, GH76, GH81, GH92 (N = 3), GH93, GH105, GH125, GH132 (N = 2) [59]
A. nidulans strain FGSC A4 High-amylose maize starch (1%), 30 °C, 150 rpm, 5 day LC–MS/MS GH1, GH2, GH3 (N = 5), GH5 (N = 3), GH6, GH7, GH10, GH11, GH13 (N = 13), GH15, GH16 N = (6), GH17 (N = 2), GH20 (N = 2), GH24, GH25 (N = 3), GH27 (N = 2), GH28 (N = 2), GH31 (N = 3), GH35, GH36, GH43 (N = 4), GH47, GH53, GH54, GH55 (N = 2), GH62, GH63, GH65, GH71 (N = 2), GH72 (N = 3), GH74, GH76, GH81, GH92 (N = 3), GH93,GH105, GH125, GH132 (N = 2) [59]
A. nidulans strain FGSC A4 Pea starch (1%), 30 °C, 150 rpm, 5 day LC–MS/MS GH1, GH2, GH3 (N = 5), GH6, GH10, GH11, GH13 (N = 13), GH15, GH16 (N = 6), GH17 (N = 3), GH20 (N = 2), GH25 (N = 3), GH27 (N = 2), GH28, GH31 (N = 3), GH35, GH36, GH43 (N = 4), GH47, GH54, GH55 (N = 2), GH63, GH65, GH71 (N = 2), GH72 (N = 3), GH74, GH76, GH81, GH92 (N = 3), GH93, GH95, GH105, GH125, GH132 (N = 2) [59]
Aspergillus fumigatus AF14 Corn straw:wheat bran (1:1), solid-state fermentation LCMS/MS GH1, GH2, GH3 (N = 7), GH5 (N = 5), GH6, GH7 (N = 5), GH10 (N = 3), GH11, GH12 (N = 2), GH17, GH27 (N = 3), GH35 (N = 3), GH38, GH43, GH47, GH51, GH54, GH61, GH67 [209]
Phanerochaete chrysosporium Corn stover (3 g/L), static, 28 °C 1D-PAGE
LC–MS/MS
GH1, GH2 (N = 2), GH3 (N = 6), Gh5 (N = 7), GH6, GH7(N = 4), GH10 (N = 4), GH12, GH13 (N = 3), GH-15, GH16 (N = 6), GH18 (N = 6), GH20 (N = 4), GH28 (N = 3), GH30 (N = 2), GH31 (N = 6), GH35 (N = 2), GH37, GH38, GH43, GH47, GH51, GH55 (N = 2), GH72, GH74, GH78, GH79 (N = 2), GH88, GH89, GH92 (N = 3), GH95, GH115, GH125, GH131 (N = 2), GH133 [69]
P. chrysosporium Corn stover (1 g/L), 28 °C, 150 rpm 1D-PAGE
LC–MS/MS
GH1, GH2 (N = 2), GH3 (N = 5), GH5 (N = 5), GH6, GH7, GH10 (N = 3), GH13 (N = 4), GH15. GH16 (N = 2), GH18 (5), GH20, GH28 (N = 3), GH30, GH31 (N = 4), GH35, GH47. GH63, GH72, GH74 (N = 4), GH92 (N = 2), GH95, GH125, GH131 [69]
P. chrysosporium strain K-3 Ammonia-treated birch wood meal (2%) 2D-PAGE
LC/MS–MS
GH3, GH5 (N = 3), GH6 (N = 2), GH7 (N = 8), GH10 (N = 7), GH11 (N = 2), GH12 (N = 2), GH28 (N = 2), GH43, GH45, GH72 (N = 4) [79]
P. chrysosporium Cellulose (1%), 30 °C and 100 rpm, 14 days 1D-PAGE, iTRAQ
LC–MS/MS
GH1 (N = 2), GH2 (N = 2), GH3 (N = 2), GH4, GH5 (N = 9), GH6, GH7 (N = 3), GH10 (N = 2). GH11, GH12, GH13 (N = 3), GH15, GH16 (N = 2), GH17 (N = 2), GH18 (N = 3), GH20, GH27, GH28 (N = 2), GH31, GH35, GH43, GH47 (N = 2), GH61, GH72, GH74, GH79, GH95 [210]
P. chrysogenum P33 Combination of different biomasses (1%), 30 °C, 200 rpm, 36 h 1D-PAGE
LC–MS/MS
GH1 (N = 3), GH2, GH3 (N = 4), GH5, GH6, GH7 (N = 2), GH10 (N = 2), GH11, GH12 (N = 3), GH27, GH35, GH36, GH43 (N = 6), GH51, GH54, GH62, GH76, GH127 [211]
Penicillium funiculosum NCIM 1228 wheat bran (2.4%) and Avicel cellulose (2.14%), 30 °C for 6 days, 150 rpm 1D-PAGE,
LC–MS/MS
GH1, GH2, GH3 (N = 12), GH5 (N = 3), GH7 (N = 2), GH6, GH10, GH11 (N = 5), GH12 (N = 2), GH13 (N = 2), GH15 (N = 4), GH16 (N = 5), GH17, GH18 (N = 4), GH20, GH27 (N = 2), GH28 (N = 2), GH30 (N = 3), GH31 (N = 4), GH35 (N = 3), GH43 (N = 3), GH51, GH53, GH54 (N = 2), GH-55, GH62 (N = 4), GH64 (N = 2), GH65, GH67, GH71 (N = 3), GH72 (N = 44), GH74, GH79, GH88, GH92 (N = 2), GH93, GH105 [109]
Penicillium sp. Dal 5 Cellulose (3%), wheat bran (1%) and rice straw (1%), 30 °C, 180 rpm, 7 days 1D-PAGE
LC–MS/MS
GH2 (N = 3), GH3 (N = 4), GH5 (N = 4), GH6, GH7 (N = 3), GH10 (N = 2), GH12, GH15 (N = 2), GH16, GH17 (N = 2), GH18 (N = 3), GH20, GH25, GH28, GH31, GH35, GH43 (N = 4), GH47, GH61, GH62 (N = 2), GH64, GH65, GH72 (N = 3), GH81, GH92 [212]
P. oxalicum JU-A10 Commercial cellulase preparations (CCP)  LC–MS/MS GH2 (N = 3), GH3 (N = 5), GH5 (N = 6), GH6, GH7 (N = 3), GH10 (N = 3), GH11 (N = 1), GH12 (N = 2), GH13, GH15 (N = 2), GH16 (N = 3), GH17 (N = 2), GH18 (N = 3), GH20, GH25, GH27, GH28 (N = 8), GH4 (N = 30), GH35. GH43 (N = 5), GH45, GH47, GH53, GH54, GH55, GH61 (N = 2), GH62 (N = 2), GH64, GH65, GH67, GH72 (N = 4), GH79, GH92, GH93 [213]
P. echinulatum strain 9A02S1-DSM18942 Integral sugar cane bagasse (1%), 29 °C, 200 rpm, 5 days LC–MS/MS GH3 (N = 2), GH5 (N = 6), GH6 (N = 4), GH7 (N = 10), GH12, GH61, GH17 (N = 2), GH10 (N = 3), GH11 (N = 2), GH62 (N = 2), GH43 (N = 2), GH28 (N = 2), GH18 [214]
Hydrothermally treated bagasse (1%), 29 °C, 200 rpm, 5 days LC–MS/MS GH3, GH5 (N = 5), GH6 (N = 5), GH7 (N = 19), GH62, GH13 [214]
Steam-explosion treated sugar cane bagasse (1%), 29 °C, 200 rpm, 5 days LC–MS/MS GH3, GH5 (N = 5), GH6 (N = 6), GH7 (N = 15), GH10 (N = 2), GH11 [214]
Sulfuric acid treated Sugar cane bagasse (1%) LC–MS/MS GH3, GH5 (N = 5), GH6 (N = 6), GH7 (N = 15), GH17, GH10, GH18 (N = 2), GH65, GH92 [214]
Microcrystalline cellulose (1%), 29 °C, 200 rpm, 5 days, LC–MS/MS GH3 (N = 2), GH5 (N = 4), GH6 (N = 4), GH7 (N = 11), GH12, GH17, GH18 (N = 4), GH20 (N = 2) [214]
Trichoderma reesei SN1 Commercial cellulase preparation LC–MS/MS GH2 (N = 2), GH3 (N = 5), GH5 (N = 4), GH6, GH7 (N = 3), GH10, GH11, GH12, GH13, GH15, GH16 (N = 2), GH17 (N = 3), GH18 (N = 3), GH20, GH25, GH27 (N = 2), GH28, GH30, GH31, GH35 (N = 2), GH36, GH37, GH45, GH54 (N = 2), GH55 (N = 2), GH61 (N = 2), GH62, GH64, GH65, GH67, GH72 (N = 3), GH74, GH76, GH92 [213]
Schizophyllum commune SH12 Jerusalem artichoke stalk (3%), static, 28 °C, 5 days 1D-PAGE
LC–MS/MS
GH1 (N = 2), GH2 (N = 2), GH3 (N = 5), GH5 (N = 4), GH6, GH7 (N = 2), GH10 (N = 3), GH11, GH13 (N = 5), GH15, GH16 (N = 4), GH17, GH18 (N = 7), GH20, GH27, GH28, GH30, GH31 (N = 4), GH32, GH35 (N = 5), GH37, GH38, GH43 (N = 10), GH45, GH47, GH51 (N = 2), GH53, GH55, GH62, GH71, GH72, GH74, GH76 (N = 5), GH81, GH88 (N = 3), GH92 (N = 3), GH93, GH115 [72]
Phanerochaete chrysosporium PC2 Jerusalem artichoke stalk (3%), static, 28 °C, 5 days 1D-PAGE
LC–MS/MS
GH3 (N = 5), GH5 (N = 5), GH6, GH7 (N = 2), GH10 (N = 4), GH12, GH13 (N = 3), GH15, GH16 (N = 3), GH18 (N = 7), GH20, GH27, GH28, GH30, GH31, GH37,GH43, GH47, GH51, GH55, GH71, GH72, GH74, GH88 (N = 2), GH92 (N = 3), GH131 [72]
Ceriporiopsis subvermispora
CBS 347.63
Jerusalem artichoke stalk (3%), static, 28 °C, 5 days 1D-PAGE
LC–MS/MS
GH2, GH3 (N = 2), GH5 (N = 3), GH10 (N = 3), GH15, GH18, GH20, GH27, GH28 (N = 2), GH35, GH37,GH43, GH47, GH51, GH55, GH72, GH88, GH92 (N = 2), GH95 [72]
Gloeophyllum trabeum Jerusalem artichoke stalk (3%), static, 28 °C, 5 days 1D-PAGE
LC–MS/MS
GH1, GH3 (N = 3), GH5 (N = 5), GH10 (N = 3), GH12, GH13, GH15, GH16 (N = 3), GH18 (N = 7), GH20, GH27, GH28 (N = 5), GH29, GH30 (N = 2), GH31 (N = 3), GH35 (N = 2), GH37, GH43 (N-2), GH47, GH51 (N = 2), GH55, GH71, GH72, GH74, GH76 (N = 2), GH78, GH79, GH88, GH92 (N = 3), GH115 [72]
Malbranchea cinnamomea CM-10 T Sorghum straw, static,45 °C, 7 days 1D-PAGE
LC–MS/MS
GH1, GH2 (N = 3), GH3 (N = 3), GH5 (N = 2), GH6, GH7 (N = 2), GH10 (N = 3), GH18 (N = 2), GH20, GH35, GH47, GH55 (N = 2), GH67, GH81, GH92, GH125 [63]
Thermobifida cellulosilytica TB100T Rice straw (1%), 50 °C, 150 rpm, 7 days LC–MS/MS GH5 (N = 2), GH6 (N = 2), GH9 (N = 2), GH10 (N = 2), GH43, GH48,GH81 [215]
Cellulomonas fimi ATCC 484 CMC (0.2%), 30 °C, 30 h 1D-PAGE
LC–MS/MS
GH3 (N = 2), GH5 (N = 2), GH6 (N = 3), GH9 (N = 2), GH10 (N = 3), GH13 (N = 2), GH16, GH18, GH23, GH26, GH48, GH51, GH64, GH81, GH94 [216]
Xylan (0.2%), 30 °C, 30 h 1D-PAGE,
LC–MS/MS
GH3 (N = 4), GH5 (N = 2), GH6 (N = 3), GH9 (N = 2), GH10 (N = 2), (N = 3), GH11, GH13 (N = 2), GH16, GH18, GH39, GH43, GH51 (N = 2), GH62, GH64, GH81 [216]
CMC (0.2%), 30 °C, 30 h 1D-PAGE,
LC–MS/MS
GH6 (N = 3), GH5 (N = 2), GH9 (N = 3), GH10 (N = 8), GH11 (N = 3), GH13, GH26, GH27, GH43 (N = 2), GH48, GH62, GH68, GH81, GH92, GH105 [216]
Xylan (0.2%), 30 °C, 30 h 1D-PAGE,
LC–MS/MS
GH6 (N = 3), GH5 (N = 2), GH9 (N = 4), GH10 (N = 10), GH11 (N = 3), GH26, GH39 (N-2), GH43, GH51, GH62, GH92 [216]
Penicillium echinulatum 2HH Steam-explosion treated sugar cane bagasse, 28 °C, 96 h 1D-PAGE,
LC–MS/MS
GH3, GH5 (N = 5), GH6, GH7 (N = 2), GH10 (N = 2), GH12, GH13, GH30, GH43 (N = 2), GH47, GH99 [62]
P. echinulatum 2HH Cellulose 1D-PAGE,
LC–MS/MS
GH3 (N = 2), GH6, GH7 (N = 2), GH5 (N = 6), GH10 (N = 2), GH12, GH13, GH30, GH132, GH43 (N = 2), GH47, GH93, GH99, GH125 [63]
Lentinula edodes Cellulose (2%), static 25 °C, 20 days LC–MS/MS GH2, GH3, GH5 (N = 2), GH6, GH7 (N = 2), GH10 (N = 2), GH12, GH15, GH27 (N = 2), GH28 (N = 4), GH35, GH43 (N = 2), GH51 (N = 2), GH53, GH74, GH95, GH115 [217]
Pleurotus eryngii Ramie stalk, static, 28 °C, 21 days 1D-PAGE
LC–MS/MS
GH1, GH2, GH3 (N = 2), GH3 (N = 3), GH7, GH15, GH16 (N = 6), GH17, GH18 (N = 2), GH20 (N = 2), GH27, GH31 (N = 5), GH35 (N = 2), GH38 (N = 2), GH45, GH51 (N = 2), GH55, GH63, GH71, GH79, GH92, GH95 [218]
Phanerochaete chrysosporium Ramie stalk, static, 28 °C, 21 days 1D-PAGE
LC–MS/MS
GH2, GH3, GH5 (N = 2), GH7 (N = 6), GH12 (N = 2), GH16 (N = 2), GH17, GH20, GH31 (N = 2), GH35, GH38, GH51 (N = 2), GH63, GH79, GH92, GH95 [218]
Irpex Lacteus Ramie stalk, static, 28 °C, 21 days 1D-PAGE
LC–MS/MS
GH1, GH2, GH3, GH5 (N = 5), GH7 (N = 4), GH13 (N = 2), GH16 (N = 6), GH18, GH20, GH27, GH31 (N = 4), GH35 (N = 3), GH38, GH45, GH51 (N = 2), GH63, GH71, GH79 (N = 2), GH92 (N = 4) [218]
Pleurotus ostreatus Ramie stalk, static, 28 °C, 21 days 1D-PAGE
LC–MS/MS
GH1, GH2, GH3, GH5,GH7 (N = 4), GH15, GH16 (N = 4), GH18, GH20, GH27, GH31, GH35, GH45, GH51 (N = 2), GH63, GH71, GH79 (N = 3), GH92 (N = 2) [218]
Clonostachys byssicola Avicel cellulose (1%), 28 °C, 120 rpm, 7 days LC–MS/MS GH2 (N = 3), GH3 (N = 5), GH5 (N = 7), GH6 (N = 3), GH7 (N = 4), GH10 (N = 5), GH12, GH15, GH16 (N = 3), GH17, GH18, GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH31 (N = 2), GH33, GH43 (N = 7), GH45, GH47, GH53, GH54 (N = 2), GH55, GH62, GH67, GH72 (N = 4), GH78, GH93 (N = 2), GH95, GH105, GH115, GH125, GH131 [219]
C. byssicola CMC (1%), 28 °C, 120 rpm, 7 days LC–MS/MS GH2, GH3 (N = 2), GH5 (N = 6), GH6 (N = 2), GH7 (N = 4), GH10 (N = 4), GH11 (N = 2), GH15, GH16 (N = 2), GH17, GH26, GH30 (N = 2), GH31, GH47, GH53, GH55, GH67, GH72 (N = 2), GH115, GH131 [219]
C. byssicola Oat spelt xylan (1%), 28 °C, 120 rpm, 7 days LC–MS/MS GH1, GH2 (N = 2), GH3 (N = 3), GH5 (N = 3), GH7, GH10 (N = 4), GH11 (N = 2), GH15, GH16 (N = 3), GH17, GH18 (N = 2), GH20, GH26 (N = 2), GH27, GH30, GH31 (N = 2), GH43 (N = 4), GH47, GH55, GH67, GH72 (N = 4), GH75, GH95, GH115 [219]
C. byssicola Corn cob (1%), 28 °C, 120 rpm, 7 days LC–MS/MS GH2 (N = 3), GH3 (N = 4), GH5 (N = 7), GH6 (N = 2), GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH12, GH16 (N = 2), GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH31 (N = 2), GH33, GH43 (N = 6), GH45, GH47, GH53, GH54 (N = 2), GH55, GH62, GH67, GH72 (N = 2), GH78, GH93, GH95, GH105, GH115, GH125, GH131 [219]
C. byssicola Banana steam (1%), 28 °C, 120 rpm, 7 days LC–MS/MS GH2 (N = 3), GH3 (N = 2), GH5 (N = 7), GH6 (N = 2), GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH12, GH16 (N = 2), GH17, GH26 (N = 2), GH28 (N = 2), GH30 (N = 2), GH31 (N = 2), GH33, GH43 (N = 5), GH45, GH47, GH53, GH55, GH62, GH67, GH72, GH93 (N = 2), GH105,GH115, GH131 [219]
C. byssicola Sugarcane bagasse (1%), 28 °C, 120 rpm, 7 days LC–MS/MS GH2 (N = 2), GH3 (N = 4), GH5 (N = 7), GH6 (N = 3), GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH12, GH17, GH18, GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH43 (N = 4), GH45, GH53, GH62, GH67, GH72, GH105, GH115, GH131 [219]
C. byssicola Soybean hulls (1%), 28 °C, 120 rpm, 7 days LC–MS/MS GH2, GH3 (N = 2), GH5 (N = 7), GH6, GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH17, GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH43 (N = 2), GH45, GH47, GH53, GH55, GH67, GH72 (N = 3), GH131 [219]
Trichoderma harzianum EM0925 Corn stover (2%), 30 °C, 3 days 1D-PAGE
LC–MS/MS
GH2 (N = 5), GH3 (N = 6), GH5 (N = 3), GH6, GH16 (N = 3), GH17, GH18 (N = 4), GH20, GH22, GH26, GH7 (N = 3), GH28, GH30 (N = 8), GH31, GH47, GH54 (N = 2), GH55 (N = 5), GH61, GH64, GH65, GH71, GH72, GH75 (N = 2), GH79 (N = 2), GH81, GH92 (N = 5), GH125, GH127 [220]
Trichoderma harzianum IOC 3844 Partially delignified cellulolignin, 30 °C, 200 rpm, 2 days 1D-PAGE
LC–MS/MS
GH2 (N = 3), GH3 (N = 6), GH5 (N = 7), GH6, GH7 (N = 2), GH10, GH11 (N = 3), GH15 (N = 2), GH16 (N = 2), GH17 (N = 2), GH18 (N = 3), GH25, GH27, GH54, GH55 (N = 4), GH61 (N = 2), GH62 (N = 2), GH64 (N = 2), GH71 (N = 2), GH74, GH81, GH92 (N = 3), GH95 [221]
Trichoderma erinaceum F3 Steam-explosion treated sugar cane bagasse (1%), 30 °C, 200 rpm, 144 h LC–MS/MS GH3 (N = 3), GH5 (N = 2), GH6, GH7 (N = 2), GH10 (N = 2), GH11 (N = 2), GH12, GH13, GH16 (N = 2), GH18, GH54, GH55 (N = 2), GH62 (N = 2), GH71, GH72 (N = 2), GH74, GH92, GH127 [222]
T. reesei strain QM9414 Cellulose (1%), 28 °C, 200 rpm, 24 h DIGE,
LC/MS–MS
GH3 (N = 6), GH7, GH17 (N = 3), GH28, GH30, GH64, GH72 (N = 2), GH74 (N = 5) [95]
Mycothermus thermophilus Cellulose, wheat bran and rice straw (3:1:1) (5%), 40 °C, 180 rpm, 10 Day Q-TOF
LC/MS
GH1, GH2 (N = 2), GH3 (N = 5), GH5, GH6 (N = 3), GH7 (N = 3), GH10 (N = 5), GH11 (N = 2), GH12, GH15, GH16 (N = 3), GH17, GH18 (N = 2), GH20, GH26, GH31, GH37, GH43 (N = 6), GH45, GH51, GH55 (N = 3), GH62 (N = 2), GH67, GH71, GH72 (N = 2), GH74, GH94, GH109, GH115, GH131 (N = 2) [223]
Myceliophthora thermophila Barley straw (1%),, 45 °C, 250 rpm, 4 days LC–MS/MS GH2 (N = 4), GH3 (N = 6), GH5 (N = 3), GH6 (N = 2), GH7 (N = 4), GH10 (N = 3), GH11 (N = 4), GH12, GH13, GH16 (7), GH17 (N = 2), GH18 (N = 2), GH20, GH24, GH25, GH26, GH27, GH28, GH30 (N = 2), GH31 (N = 2), GH33, GH37, GH43 (N = 8), GH47, GH51, GH53, GH55 (N = 4), GH62 (N = 2), GH67, GH71, GH72 (N = 4), GH75, GH76 (N = 2), GH79 (N = 2), GH81, GH92, GH93 (N = 2), GH95, GH114, GH115 (N = 2) [224]
Talaromyces emersonii MTCC387 Cellulose (3%) and wheat grain flour (1.5%), 44° C, 250 rpm, 7 days LC–MS/MS GH2, GH3 (N = 7), GH5 (N = 3), GH6, GH7 (N = 2), GH10 (N = 2), GH12, GH16 (N = 2), GH43, GH45, GH57, GH81, GH127, GH131 [155]
Podospora anserina Avicel cellulose/Sugar beet pulp (1%), 27 °C, 100 rpm, 4 days 1D-PAGE
LC–MS/MS
GH2, GH3, GH5, GH6 (N = 2), GH7 (N = 2), GH10, GH15 (N = 2), GH27, GH31, GH37, GH55 (N = 2) [196]
Laetiporus sulphureus CMC (2%), 27 °C, 24 days 1D-PAGE
LC–MS/MS
GH2, GH3 (N = 2), GH5, GH7, GH10 (N = 2), GH15, GH16, GH18, GH27 (N = 2), GH31, GH37, GH45, GH55, GH92, GH121 [225]
Pleurotus ostreatus Sugar cane bagasse (4%), 27 °C, 24 Days 1D-PAGE
LC–MS/MS
GH3 (N = 3), GH5 (N = 2), GH6, GH7 (N = 2), GH10, GH15, GH27 (N = 2), GH47 (N = 2), GH51, GH76 (N = 2), GH92, [225]
Peniophora sp. CBMAI 1063 Standard medium, 28 °C, 140 rpm, 7 days 1D-PAGE
LC–MS/MS
GH10, GH13 (N = 3), GH15 (N = 3), GH16 (N = 2), GH18 (N = 3), GH20 (N = 2), GH28, GH30 (N = 2), GH31 (N = 3), GH32, GH43 (N = 5), GH51, GH72, GH76 (N = 2), GH78, GH88, GH92 (N = 3), GH95, GH125, GH128 [178]
P. ostreatus Wheat straw, 28 °C, 21 days LC–MS/MS GH1, GH2 (N = 2), GH3 (N = 4), GH5 (N = 3), GH6, GH7 (N = 3), GH10, GH12, GH13, GH15, GH16, GH20 (N = 2), GH27 (N = 2), GH28, GH31, GH35 (N = 2), GH37, GH47 (N = 3), GH51, GH55, GH72, GH76, GH79, GH88, GH105, GH115 (N = 2) [226]
P. chrysosporium Wheat straw, 28 °C, 21 days LC–MS/MS GH2, GH3 (N = 5), GH5 (N = 7), GH6, GH7 (N = 4), GH10 (N = 5), GH11, GH12, GH13 (N = 2), GH17, GH18 (N = 5), GH20, GH27, GH28 (N = 3), GH30, GH31, GH35, GH37, GH43 (N = 4), GH45, GH47 (N = 3), GH53, GH61 (N = 2), GH71, GH88, GH155 [226]
Irpex lacteus Corn-step solids growth medium, 28 °C, 21 days LC–MS/MS GH2 (N = 2), GH3 (N = 3), GH5 (N = 2), GH7, GH15 (N = 2), GH30, GH31 (N = 2), GH35 (N = 3), GH43, GH92 (N = 2), GH105, GH125 [226]
Irpex lacteus Wheat straw, 28 °C, 21 days LC–MS/MS GH2, GH3 (N = 2), GH5 (N = 2), GH6, GH7 (N = 3), GH10 (N = 2), GH35 (N = 2), GH43, GH57, GH61, GH74, GH92 [226]
D. decipiens oita Cellulose (1%), 25 °C, 150 rpm, 3 days LC–MS/MS GH2 (N = 2), GH3 (N = 6), GH5 (N = 5), GH6, GH7 (N = 4), GH10, GH11 (N = 3), GH13, GH15 (N = 2), GH16 (N = 2), GH17 (N = 2), GH18 (N = 3), GH28 (N = 2), GH29, GH30 (N = 2), GH31, GH32, GH37, GH43 (N = 6), GH45, GH47, GH51, GH55 (N = 3), GH71, GH72 (N = 3), GH74, GH76, GH79 (N = 2), GH92 (N = 2), GH93, GH125 [227]
Trichoderma guizhouense NJAU4742 Rice straw (1%), 28 °C, 170 rpm, 6 days 1D-PAGE
LC–MS/MS
GH1, GH2, GH3, GH5, GH6, GH7, GH10, GH11, GH12, GH13, GH15, GH16, GH17, GH18, GH20, GH23, GH24, GH25, GH27, GH28, GH30, GH31, GH35, GH39, GH43, GH47, GH50, GH54, GH55, GH61, GH62, GH64, GH65, GH67, GH71, GH72, GH74, GH75, GH76, GH79, GH81, GH92, GH95, GH125, GH127, GH128 [228]
Postia placenta Aspen wafer sections, solid-state fermentation LC–MS/MS GH3, GH5 (N = 4), GH10, GH16 (N = 2), GH27, GH28, GH47, GH51, GH55 (N = 3), GH79 [229]
Gloeophyllum trabeum Aspen wafer sections, solid-state fermentation LC–MS/MS GH2, GH3 (N = 3), GH5 (N = 4), GH10 (N = 2), GH12, GH16, GH18, GH20 (N = 2), GH27, GH28 (N = 3), GH31, GH35, GH47, GH51, GH55, GH72, GH79, GH115 (N = 2) [229]
Trametes versicolor Aspen wafer sections, solid-state fermentation LC–MS/MS GH2, GH3 (N = 4), GH5 (N = 3), GH6, GH7 (N = 4), GH10 (N = 2), GH12 (N = 2), GH18, GH20 (N = 2), GH27, GH28 (N = 3), GH30, GH31, GH35, GH43 (N = 2), GH47, GH51, GH53, GH79, GH92 (N = 2), GH115, GH131 [229]
Stereum hirsutum Aspen wafer sections, solid-state fermentation LC–MS/MS GH3, GH5 (N = 3), GH6, GH7, GH10 (N = 2), GH15 (N = 2), GH18 (N = 3), GH28 (N = 2), GH72, GH75, GH79 [229]
P.chrysosporium RP-78 Avicel cellulose (2%), 37 °C, 150 rpm, 12 days 1D-PAGE
LC–MS/MS
GH5 (N = 4), GH6, GH7 (N = 4), GH10 (N = 4), GH11, GH12, GH15, GH18, GH43 (N = 3), GH28 (N = 2), GH31, GH45, GH55, GH74 (N = 2), GH131 [230]
T. versicolor BAFC 266 Avicel cellulose (2%), 27 °C, 150 rpm, 12 days 1D-PAGE
LC–MS/MS
GH3, GH5 (N = 4), GH6, GH7 (N = 3), GH10 (N = 3), GH12 (N = 2), GH18, GH21, GH30, GH31, GH32, GH43, GH45, GH47, GH51, GH53, GH74, GH78, GH92, GH131(N = 3) [230]
Chrysoporthe cubensis LPF-1 Wheat bran, semi-solid fermentation, 28 °C, 7 days 1D-PAGE
LC–MS/MS
GH1 (N = 2), GH2 (N = 2), GH3 (N = 9), GH5 (N = 2), GH6 (N = 2), GH7 (N = 3), GH10 (N = 3), GH11 (N = 3), GH12, GH16 (N = 3), GH17 (N = 3), GH27 (N = 3), GH28 (N = 4), GH29 (N = 2), GH35 (N = 2), GH39, GH43 (N = 3), GH45 (N = 2), GH47 (N = 2), GH51, GH54, GH64, GH67, GH71, GH72, GH74, GH78 (N = 4), GH79, GH81, GH93 (N = 3), GH106 (N = 2), GH115, GH128, GH131 (N = 2), GH132, GH140 [142]
Aspergillus clavatus NRRL1 Sugarcane bagasse (1%), 30 °C, 250 rpm, 5 days 1D-PAGE
LC–MS/MS
GH3 (N = 4), GH7 (N = 2), GH5, GH11, GH17, GH27, GH28 (N = 2), GH43, GH62 (N = 2) [231]
Wolfiporia cocos Debarked and wiley-milled aspen (0.5%), 5 °C, 150 rpm, 5 days 1D-PAGE
LC–MS/MS
GH3 (N = 2), GH5 (N = 3), GH10 (N = 2), GH15, GH16, GH18 (N = 2), GH28, GH51, GH79, GH115 (N = 2), GH125 [232]
Ceriporiopsis subvermispora strain B Ball-milled bigtooth aspen (0.5%), 26.5 °C, 150 rpm, 3, 5 and 7 days LC–MS/MS GH2 (N = 2), GH3 (N = 2), GH5 (N = 8), GH6, GH7 (N = 2), GH10 (N = 6), GH12, GH13 (N = 2), GH15 (N = 2), GH16 (N = 6), GH18 (N = 4), GH20 (N = 2), GH27 (N = 2), GH28 (N = 2), GH30, GH3 (N = 3), GH37, GH43, GH47, GH51, GH55 (N = 2), GH72, GH74, GH78, GH79 (N = 2), GH88, GH89, GH92 (N = 3), GH95, GH115 (N = 2) [233]