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Table 1 List of lignocellulosic biomass-degrading microbe’s secretome analysed

From: Harnessing microbial wealth for lignocellulose biomass valorization through secretomics: a review

Fungi

Substrate and culture conditions

Proteomic analysis

Distribution of GHs in the secretome of lignocellulolytic fungi

References

Doratomyces stemonitis C8

Avicel cellulose (1.5%), 250 rpm, 7 days, 28 °C

2D-PAGE, LC–MS/MS

GH3 (N = 4), GH5 (N = 4), GH7 (N = 3), GH10 (N = 2), GH43 (N = 2), GH62, GH74, GH78

[206]

A. fumigatus AF293

Sugarcane bagasse (1%), 37 °C, 24 h

SDS-PAGE

LC–MS/MS

GH1, GH2, GH3, GH6, GH7 (N = 3), GH10 (N = 2), GH11 (N = 2), GH13, GH131, GH15, GH16 (N = 5), GH17 (N = 2), GH18 (N = 4), GH25, GH27(N = 2), GH28, GH30, GH43 (N = 6), GH47 (N = 2), GH5 (N = 7), GH53, GH55, GH62 (N-2), GH65, GH71, GH72 (N = 2), GH76, GH81, GH92, GH93

[154]

A. fumigatus Z5

Rice straw (1%), 50 °C, 170 rpm, 7 days

iTRAQ

LC–MS/MS

GH3 (N = 2), GH5, GH6, GH7 (N = 2), GH10 (N = 3), GH11 (N = 2), GH12, GH15, GH16, GH17, GH18 (N = 4), GH27, GH30, GH43 (N = 3), GH47, GH61(N = 2), GH62

[152]

Fusarium verticillioides

Wheat straw, 30 °C, 110 rpm 7 days

1D-PAGE

LC–MS/MS

GH1, GH3 (N = 6), GH5 (N = 2), GH7, GH10 (N = 4), GH11, GH13, GH15 (N = 2), GH16, GH27 (N = 3), GH28 (N = 2), GH29 (N = 2), GH30, GH31, GH32, GH39, GH43 (N = 8), GH51, GH54, GH61 (N = 2), GH62, GH67, GH76, GH79, GH88, GH93 (N = 2)

[207]

T. reesei Rut-C30

Sugarcane bagasse (1%), 30 °C, 200 rpm,

72 h

LC–MS/MS

GH1 (N = 2), GH2 (N = 2), GH3 (N = 2), GH5 (N = 3), GH6, GH7, GH10 (N = 2), GH11(N = 3), GH12, GH15, GH16 (N = 3), GH17 (N = 3), GH18 (N = 2),GH20, GH28 (N = 2), GH31, GH43 (N = 5), GH47 (N = 2), GH55, GH57, GH61(N = 2), GH67, GH71(N = 4), GH72 (N = 2), GH74 (N = 2), GH75, GH92 (N = 2)

[208]

T. reesei Rut-C30

Sugarcane bagasse (1%), 30 °C, static for 24 h, 30 °C, 200 rpm, 48 h

LC–MS/MS

GH2, GH3, GH5, GH6, GH7, GH10 (N = 2), GH11(N = 4), GH12, GH15, GH16, GH18 (N = 2), GH31, GH38, GH47 (N = 2), GH57, GH61, GH67 (N = 2), GH71 (N = 2), GH74, GH75, GH92

[208]

T. reesei Rut-C30

Sugarcane bagasse, 0 °C, 3 days

1D-PAGE

LC–MS/MS

GH1 (N = 2), GH2, GH3 (N = 5), GH5 (N = 2), GH6 (N = 2), GH7 (N = 2), GH11 (N = 3), GH20, GH25, GH27 (N = 2), GH28, GH30, GH31, GH35, GH36,GH37, GH54 (N = 2), GH55, GH61 (N = 2), GH62, GH67, GH72 (N = 2), GH74, GH92

[53]

Trichoderma asperellum S4F8

Sugarcane bagasse, 30 °C, 3 days

1D-PAGE

LC–MS/MS

GH1 (N = 2), GH2, GH3 (N = 6), GH5 (N = 5), GH6, GH7 (N = 2), GH10, GH11(N = 4), GH12, GH15 (N = 2), GH16 (N = 2), GH17, GH18 (N = 3), GH20, GH25, GH27 (N = 2), GH28 (N = 2), GH31 (N = 2), GH35, GH36, GH43, GH47, GH54 (N = 2), GH55, GH62 (N = 2), GH67, GH72 (N = 3), GH74, GH79, GH92 (N = 3), GH93, GH95

[53]

A. niger A12

Sugarcane bagasse (1%), 32 °C, 200 rpm, 72 h

LC–MS/MS

GH2, GH3 (N = 2), GH5, GH7, GH11(N = 2), GH12, GH15, GH16, GH18, GH20, GH31 (N = 2), GH32, GH35, GH38 (N = 2), GH43, GH47, GH62 (N = 2), GH64, GH72 (N = 2)

[208]

A. niger A12

Sugarcane bagasse (1%),, 32 °C, static for 24 h, 32 °C, 200 rpm, 48 h

LC–MS/MS

GH2 (N = 2), GH3 (N = 4), GH5, GH7, GH11(N = 3), GH12(N = 3), GH15, GH16, GH31 (N = 2), GH32, GH35, GH43 (N = 2), GH47, GH62 (N = 2), GH64, GH72 (N = 3)

[208]

A. nidulans strain FGSCA4

Wheat starch (1%), 30 °C, 150 rpm, 5 days

LC–MS/MS

GH1, GH2, GH3 (N = 5), GH5, GH6, GH7, GH10, GH11, GH13 (N = 13), GH15, GH16 (N = 6), GH17 (N = 2), GH20 (N = 2), GH25 (N = 3),GH27 (N = 2), GH28, GH31 (N = 3), GH36, GH43 (N = 4), GH47, GH53, GH54, GH55 (N = 2),GH62, GH63, GH65, GH71 (N = 2), GH72 (N = 3), GH74, GH76, GH81, GH92 (N = 3), GH93, GH105, GH125, GH132 (N = 2)

[59]

A. nidulans strain FGSC A4

High-amylose maize starch (1%), 30 °C, 150 rpm, 5 day

LC–MS/MS

GH1, GH2, GH3 (N = 5), GH5 (N = 3), GH6, GH7, GH10, GH11, GH13 (N = 13), GH15, GH16 N = (6), GH17 (N = 2), GH20 (N = 2), GH24, GH25 (N = 3), GH27 (N = 2), GH28 (N = 2), GH31 (N = 3), GH35, GH36, GH43 (N = 4), GH47, GH53, GH54, GH55 (N = 2), GH62, GH63, GH65, GH71 (N = 2), GH72 (N = 3), GH74, GH76, GH81, GH92 (N = 3), GH93,GH105, GH125, GH132 (N = 2)

[59]

A. nidulans strain FGSC A4

Pea starch (1%), 30 °C, 150 rpm, 5 day

LC–MS/MS

GH1, GH2, GH3 (N = 5), GH6, GH10, GH11, GH13 (N = 13), GH15, GH16 (N = 6), GH17 (N = 3), GH20 (N = 2), GH25 (N = 3), GH27 (N = 2), GH28, GH31 (N = 3), GH35, GH36, GH43 (N = 4), GH47, GH54, GH55 (N = 2), GH63, GH65, GH71 (N = 2), GH72 (N = 3), GH74, GH76, GH81, GH92 (N = 3), GH93, GH95, GH105, GH125, GH132 (N = 2)

[59]

Aspergillus fumigatus AF14

Corn straw:wheat bran (1:1), solid-state fermentation

LCMS/MS

GH1, GH2, GH3 (N = 7), GH5 (N = 5), GH6, GH7 (N = 5), GH10 (N = 3), GH11, GH12 (N = 2), GH17, GH27 (N = 3), GH35 (N = 3), GH38, GH43, GH47, GH51, GH54, GH61, GH67

[209]

Phanerochaete chrysosporium

Corn stover (3 g/L), static, 28 °C

1D-PAGE

LC–MS/MS

GH1, GH2 (N = 2), GH3 (N = 6), Gh5 (N = 7), GH6, GH7(N = 4), GH10 (N = 4), GH12, GH13 (N = 3), GH-15, GH16 (N = 6), GH18 (N = 6), GH20 (N = 4), GH28 (N = 3), GH30 (N = 2), GH31 (N = 6), GH35 (N = 2), GH37, GH38, GH43, GH47, GH51, GH55 (N = 2), GH72, GH74, GH78, GH79 (N = 2), GH88, GH89, GH92 (N = 3), GH95, GH115, GH125, GH131 (N = 2), GH133

[69]

P. chrysosporium

Corn stover (1 g/L), 28 °C, 150 rpm

1D-PAGE

LC–MS/MS

GH1, GH2 (N = 2), GH3 (N = 5), GH5 (N = 5), GH6, GH7, GH10 (N = 3), GH13 (N = 4), GH15. GH16 (N = 2), GH18 (5), GH20, GH28 (N = 3), GH30, GH31 (N = 4), GH35, GH47. GH63, GH72, GH74 (N = 4), GH92 (N = 2), GH95, GH125, GH131

[69]

P. chrysosporium strain K-3

Ammonia-treated birch wood meal (2%)

2D-PAGE

LC/MS–MS

GH3, GH5 (N = 3), GH6 (N = 2), GH7 (N = 8), GH10 (N = 7), GH11 (N = 2), GH12 (N = 2), GH28 (N = 2), GH43, GH45, GH72 (N = 4)

[79]

P. chrysosporium

Cellulose (1%), 30 °C and 100 rpm, 14 days

1D-PAGE, iTRAQ

LC–MS/MS

GH1 (N = 2), GH2 (N = 2), GH3 (N = 2), GH4, GH5 (N = 9), GH6, GH7 (N = 3), GH10 (N = 2). GH11, GH12, GH13 (N = 3), GH15, GH16 (N = 2), GH17 (N = 2), GH18 (N = 3), GH20, GH27, GH28 (N = 2), GH31, GH35, GH43, GH47 (N = 2), GH61, GH72, GH74, GH79, GH95

[210]

P. chrysogenum P33

Combination of different biomasses (1%), 30 °C, 200 rpm, 36 h

1D-PAGE

LC–MS/MS

GH1 (N = 3), GH2, GH3 (N = 4), GH5, GH6, GH7 (N = 2), GH10 (N = 2), GH11, GH12 (N = 3), GH27, GH35, GH36, GH43 (N = 6), GH51, GH54, GH62, GH76, GH127

[211]

Penicillium funiculosum NCIM 1228

wheat bran (2.4%) and Avicel cellulose (2.14%), 30 °C for 6 days, 150 rpm

1D-PAGE,

LC–MS/MS

GH1, GH2, GH3 (N = 12), GH5 (N = 3), GH7 (N = 2), GH6, GH10, GH11 (N = 5), GH12 (N = 2), GH13 (N = 2), GH15 (N = 4), GH16 (N = 5), GH17, GH18 (N = 4), GH20, GH27 (N = 2), GH28 (N = 2), GH30 (N = 3), GH31 (N = 4), GH35 (N = 3), GH43 (N = 3), GH51, GH53, GH54 (N = 2), GH-55, GH62 (N = 4), GH64 (N = 2), GH65, GH67, GH71 (N = 3), GH72 (N = 44), GH74, GH79, GH88, GH92 (N = 2), GH93, GH105

[109]

Penicillium sp. Dal 5

Cellulose (3%), wheat bran (1%) and rice straw (1%), 30 °C, 180 rpm, 7 days

1D-PAGE

LC–MS/MS

GH2 (N = 3), GH3 (N = 4), GH5 (N = 4), GH6, GH7 (N = 3), GH10 (N = 2), GH12, GH15 (N = 2), GH16, GH17 (N = 2), GH18 (N = 3), GH20, GH25, GH28, GH31, GH35, GH43 (N = 4), GH47, GH61, GH62 (N = 2), GH64, GH65, GH72 (N = 3), GH81, GH92

[212]

P. oxalicum JU-A10

Commercial cellulase preparations (CCP) 

LC–MS/MS

GH2 (N = 3), GH3 (N = 5), GH5 (N = 6), GH6, GH7 (N = 3), GH10 (N = 3), GH11 (N = 1), GH12 (N = 2), GH13, GH15 (N = 2), GH16 (N = 3), GH17 (N = 2), GH18 (N = 3), GH20, GH25, GH27, GH28 (N = 8), GH4 (N = 30), GH35. GH43 (N = 5), GH45, GH47, GH53, GH54, GH55, GH61 (N = 2), GH62 (N = 2), GH64, GH65, GH67, GH72 (N = 4), GH79, GH92, GH93

[213]

P. echinulatum strain 9A02S1-DSM18942

Integral sugar cane bagasse (1%), 29 °C, 200 rpm, 5 days

LC–MS/MS

GH3 (N = 2), GH5 (N = 6), GH6 (N = 4), GH7 (N = 10), GH12, GH61, GH17 (N = 2), GH10 (N = 3), GH11 (N = 2), GH62 (N = 2), GH43 (N = 2), GH28 (N = 2), GH18

[214]

Hydrothermally treated bagasse (1%), 29 °C, 200 rpm, 5 days

LC–MS/MS

GH3, GH5 (N = 5), GH6 (N = 5), GH7 (N = 19), GH62, GH13

[214]

Steam-explosion treated sugar cane bagasse (1%), 29 °C, 200 rpm, 5 days

LC–MS/MS

GH3, GH5 (N = 5), GH6 (N = 6), GH7 (N = 15), GH10 (N = 2), GH11

[214]

Sulfuric acid treated Sugar cane bagasse (1%)

LC–MS/MS

GH3, GH5 (N = 5), GH6 (N = 6), GH7 (N = 15), GH17, GH10, GH18 (N = 2), GH65, GH92

[214]

Microcrystalline cellulose (1%), 29 °C, 200 rpm, 5 days,

LC–MS/MS

GH3 (N = 2), GH5 (N = 4), GH6 (N = 4), GH7 (N = 11), GH12, GH17, GH18 (N = 4), GH20 (N = 2)

[214]

Trichoderma reesei SN1

Commercial cellulase preparation

LC–MS/MS

GH2 (N = 2), GH3 (N = 5), GH5 (N = 4), GH6, GH7 (N = 3), GH10, GH11, GH12, GH13, GH15, GH16 (N = 2), GH17 (N = 3), GH18 (N = 3), GH20, GH25, GH27 (N = 2), GH28, GH30, GH31, GH35 (N = 2), GH36, GH37, GH45, GH54 (N = 2), GH55 (N = 2), GH61 (N = 2), GH62, GH64, GH65, GH67, GH72 (N = 3), GH74, GH76, GH92

[213]

Schizophyllum commune SH12

Jerusalem artichoke stalk (3%), static, 28 °C, 5 days

1D-PAGE

LC–MS/MS

GH1 (N = 2), GH2 (N = 2), GH3 (N = 5), GH5 (N = 4), GH6, GH7 (N = 2), GH10 (N = 3), GH11, GH13 (N = 5), GH15, GH16 (N = 4), GH17, GH18 (N = 7), GH20, GH27, GH28, GH30, GH31 (N = 4), GH32, GH35 (N = 5), GH37, GH38, GH43 (N = 10), GH45, GH47, GH51 (N = 2), GH53, GH55, GH62, GH71, GH72, GH74, GH76 (N = 5), GH81, GH88 (N = 3), GH92 (N = 3), GH93, GH115

[72]

Phanerochaete chrysosporium PC2

Jerusalem artichoke stalk (3%), static, 28 °C, 5 days

1D-PAGE

LC–MS/MS

GH3 (N = 5), GH5 (N = 5), GH6, GH7 (N = 2), GH10 (N = 4), GH12, GH13 (N = 3), GH15, GH16 (N = 3), GH18 (N = 7), GH20, GH27, GH28, GH30, GH31, GH37,GH43, GH47, GH51, GH55, GH71, GH72, GH74, GH88 (N = 2), GH92 (N = 3), GH131

[72]

Ceriporiopsis subvermispora

CBS 347.63

Jerusalem artichoke stalk (3%), static, 28 °C, 5 days

1D-PAGE

LC–MS/MS

GH2, GH3 (N = 2), GH5 (N = 3), GH10 (N = 3), GH15, GH18, GH20, GH27, GH28 (N = 2), GH35, GH37,GH43, GH47, GH51, GH55, GH72, GH88, GH92 (N = 2), GH95

[72]

Gloeophyllum trabeum

Jerusalem artichoke stalk (3%), static, 28 °C, 5 days

1D-PAGE

LC–MS/MS

GH1, GH3 (N = 3), GH5 (N = 5), GH10 (N = 3), GH12, GH13, GH15, GH16 (N = 3), GH18 (N = 7), GH20, GH27, GH28 (N = 5), GH29, GH30 (N = 2), GH31 (N = 3), GH35 (N = 2), GH37, GH43 (N-2), GH47, GH51 (N = 2), GH55, GH71, GH72, GH74, GH76 (N = 2), GH78, GH79, GH88, GH92 (N = 3), GH115

[72]

Malbranchea cinnamomea CM-10 T

Sorghum straw, static,45 °C, 7 days

1D-PAGE

LC–MS/MS

GH1, GH2 (N = 3), GH3 (N = 3), GH5 (N = 2), GH6, GH7 (N = 2), GH10 (N = 3), GH18 (N = 2), GH20, GH35, GH47, GH55 (N = 2), GH67, GH81, GH92, GH125

[63]

Thermobifida cellulosilytica TB100T

Rice straw (1%), 50 °C, 150 rpm, 7 days

LC–MS/MS

GH5 (N = 2), GH6 (N = 2), GH9 (N = 2), GH10 (N = 2), GH43, GH48,GH81

[215]

Cellulomonas fimi ATCC 484

CMC (0.2%), 30 °C, 30 h

1D-PAGE

LC–MS/MS

GH3 (N = 2), GH5 (N = 2), GH6 (N = 3), GH9 (N = 2), GH10 (N = 3), GH13 (N = 2), GH16, GH18, GH23, GH26, GH48, GH51, GH64, GH81, GH94

[216]

Xylan (0.2%), 30 °C, 30 h

1D-PAGE,

LC–MS/MS

GH3 (N = 4), GH5 (N = 2), GH6 (N = 3), GH9 (N = 2), GH10 (N = 2), (N = 3), GH11, GH13 (N = 2), GH16, GH18, GH39, GH43, GH51 (N = 2), GH62, GH64, GH81

[216]

CMC (0.2%), 30 °C, 30 h

1D-PAGE,

LC–MS/MS

GH6 (N = 3), GH5 (N = 2), GH9 (N = 3), GH10 (N = 8), GH11 (N = 3), GH13, GH26, GH27, GH43 (N = 2), GH48, GH62, GH68, GH81, GH92, GH105

[216]

Xylan (0.2%), 30 °C, 30 h

1D-PAGE,

LC–MS/MS

GH6 (N = 3), GH5 (N = 2), GH9 (N = 4), GH10 (N = 10), GH11 (N = 3), GH26, GH39 (N-2), GH43, GH51, GH62, GH92

[216]

Penicillium echinulatum 2HH

Steam-explosion treated sugar cane bagasse, 28 °C, 96 h

1D-PAGE,

LC–MS/MS

GH3, GH5 (N = 5), GH6, GH7 (N = 2), GH10 (N = 2), GH12, GH13, GH30, GH43 (N = 2), GH47, GH99

[62]

P. echinulatum 2HH

Cellulose

1D-PAGE,

LC–MS/MS

GH3 (N = 2), GH6, GH7 (N = 2), GH5 (N = 6), GH10 (N = 2), GH12, GH13, GH30, GH132, GH43 (N = 2), GH47, GH93, GH99, GH125

[63]

Lentinula edodes

Cellulose (2%), static 25 °C, 20 days

LC–MS/MS

GH2, GH3, GH5 (N = 2), GH6, GH7 (N = 2), GH10 (N = 2), GH12, GH15, GH27 (N = 2), GH28 (N = 4), GH35, GH43 (N = 2), GH51 (N = 2), GH53, GH74, GH95, GH115

[217]

Pleurotus eryngii

Ramie stalk, static, 28 °C, 21 days

1D-PAGE

LC–MS/MS

GH1, GH2, GH3 (N = 2), GH3 (N = 3), GH7, GH15, GH16 (N = 6), GH17, GH18 (N = 2), GH20 (N = 2), GH27, GH31 (N = 5), GH35 (N = 2), GH38 (N = 2), GH45, GH51 (N = 2), GH55, GH63, GH71, GH79, GH92, GH95

[218]

Phanerochaete chrysosporium

Ramie stalk, static, 28 °C, 21 days

1D-PAGE

LC–MS/MS

GH2, GH3, GH5 (N = 2), GH7 (N = 6), GH12 (N = 2), GH16 (N = 2), GH17, GH20, GH31 (N = 2), GH35, GH38, GH51 (N = 2), GH63, GH79, GH92, GH95

[218]

Irpex Lacteus

Ramie stalk, static, 28 °C, 21 days

1D-PAGE

LC–MS/MS

GH1, GH2, GH3, GH5 (N = 5), GH7 (N = 4), GH13 (N = 2), GH16 (N = 6), GH18, GH20, GH27, GH31 (N = 4), GH35 (N = 3), GH38, GH45, GH51 (N = 2), GH63, GH71, GH79 (N = 2), GH92 (N = 4)

[218]

Pleurotus ostreatus

Ramie stalk, static, 28 °C, 21 days

1D-PAGE

LC–MS/MS

GH1, GH2, GH3, GH5,GH7 (N = 4), GH15, GH16 (N = 4), GH18, GH20, GH27, GH31, GH35, GH45, GH51 (N = 2), GH63, GH71, GH79 (N = 3), GH92 (N = 2)

[218]

Clonostachys byssicola

Avicel cellulose (1%), 28 °C, 120 rpm, 7 days

LC–MS/MS

GH2 (N = 3), GH3 (N = 5), GH5 (N = 7), GH6 (N = 3), GH7 (N = 4), GH10 (N = 5), GH12, GH15, GH16 (N = 3), GH17, GH18, GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH31 (N = 2), GH33, GH43 (N = 7), GH45, GH47, GH53, GH54 (N = 2), GH55, GH62, GH67, GH72 (N = 4), GH78, GH93 (N = 2), GH95, GH105, GH115, GH125, GH131

[219]

C. byssicola

CMC (1%), 28 °C, 120 rpm, 7 days

LC–MS/MS

GH2, GH3 (N = 2), GH5 (N = 6), GH6 (N = 2), GH7 (N = 4), GH10 (N = 4), GH11 (N = 2), GH15, GH16 (N = 2), GH17, GH26, GH30 (N = 2), GH31, GH47, GH53, GH55, GH67, GH72 (N = 2), GH115, GH131

[219]

C. byssicola

Oat spelt xylan (1%), 28 °C, 120 rpm, 7 days

LC–MS/MS

GH1, GH2 (N = 2), GH3 (N = 3), GH5 (N = 3), GH7, GH10 (N = 4), GH11 (N = 2), GH15, GH16 (N = 3), GH17, GH18 (N = 2), GH20, GH26 (N = 2), GH27, GH30, GH31 (N = 2), GH43 (N = 4), GH47, GH55, GH67, GH72 (N = 4), GH75, GH95, GH115

[219]

C. byssicola

Corn cob (1%), 28 °C, 120 rpm, 7 days

LC–MS/MS

GH2 (N = 3), GH3 (N = 4), GH5 (N = 7), GH6 (N = 2), GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH12, GH16 (N = 2), GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH31 (N = 2), GH33, GH43 (N = 6), GH45, GH47, GH53, GH54 (N = 2), GH55, GH62, GH67, GH72 (N = 2), GH78, GH93, GH95, GH105, GH115, GH125, GH131

[219]

C. byssicola

Banana steam (1%), 28 °C, 120 rpm, 7 days

LC–MS/MS

GH2 (N = 3), GH3 (N = 2), GH5 (N = 7), GH6 (N = 2), GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH12, GH16 (N = 2), GH17, GH26 (N = 2), GH28 (N = 2), GH30 (N = 2), GH31 (N = 2), GH33, GH43 (N = 5), GH45, GH47, GH53, GH55, GH62, GH67, GH72, GH93 (N = 2), GH105,GH115, GH131

[219]

C. byssicola

Sugarcane bagasse (1%), 28 °C, 120 rpm, 7 days

LC–MS/MS

GH2 (N = 2), GH3 (N = 4), GH5 (N = 7), GH6 (N = 3), GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH12, GH17, GH18, GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH43 (N = 4), GH45, GH53, GH62, GH67, GH72, GH105, GH115, GH131

[219]

C. byssicola

Soybean hulls (1%), 28 °C, 120 rpm, 7 days

LC–MS/MS

GH2, GH3 (N = 2), GH5 (N = 7), GH6, GH7 (N = 4), GH10 (N = 5), GH11 (N = 2), GH17, GH26 (N = 2), GH28 (N = 3), GH30 (N = 2), GH43 (N = 2), GH45, GH47, GH53, GH55, GH67, GH72 (N = 3), GH131

[219]

Trichoderma harzianum EM0925

Corn stover (2%), 30 °C, 3 days

1D-PAGE

LC–MS/MS

GH2 (N = 5), GH3 (N = 6), GH5 (N = 3), GH6, GH16 (N = 3), GH17, GH18 (N = 4), GH20, GH22, GH26, GH7 (N = 3), GH28, GH30 (N = 8), GH31, GH47, GH54 (N = 2), GH55 (N = 5), GH61, GH64, GH65, GH71, GH72, GH75 (N = 2), GH79 (N = 2), GH81, GH92 (N = 5), GH125, GH127

[220]

Trichoderma harzianum IOC 3844

Partially delignified cellulolignin, 30 °C, 200 rpm, 2 days

1D-PAGE

LC–MS/MS

GH2 (N = 3), GH3 (N = 6), GH5 (N = 7), GH6, GH7 (N = 2), GH10, GH11 (N = 3), GH15 (N = 2), GH16 (N = 2), GH17 (N = 2), GH18 (N = 3), GH25, GH27, GH54, GH55 (N = 4), GH61 (N = 2), GH62 (N = 2), GH64 (N = 2), GH71 (N = 2), GH74, GH81, GH92 (N = 3), GH95

[221]

Trichoderma erinaceum F3

Steam-explosion treated sugar cane bagasse (1%), 30 °C, 200 rpm, 144 h

LC–MS/MS

GH3 (N = 3), GH5 (N = 2), GH6, GH7 (N = 2), GH10 (N = 2), GH11 (N = 2), GH12, GH13, GH16 (N = 2), GH18, GH54, GH55 (N = 2), GH62 (N = 2), GH71, GH72 (N = 2), GH74, GH92, GH127

[222]

T. reesei strain QM9414

Cellulose (1%), 28 °C, 200 rpm, 24 h

DIGE,

LC/MS–MS

GH3 (N = 6), GH7, GH17 (N = 3), GH28, GH30, GH64, GH72 (N = 2), GH74 (N = 5)

[95]

Mycothermus thermophilus

Cellulose, wheat bran and rice straw (3:1:1) (5%), 40 °C, 180 rpm, 10 Day

Q-TOF

LC/MS

GH1, GH2 (N = 2), GH3 (N = 5), GH5, GH6 (N = 3), GH7 (N = 3), GH10 (N = 5), GH11 (N = 2), GH12, GH15, GH16 (N = 3), GH17, GH18 (N = 2), GH20, GH26, GH31, GH37, GH43 (N = 6), GH45, GH51, GH55 (N = 3), GH62 (N = 2), GH67, GH71, GH72 (N = 2), GH74, GH94, GH109, GH115, GH131 (N = 2)

[223]

Myceliophthora thermophila

Barley straw (1%),, 45 °C, 250 rpm, 4 days

LC–MS/MS

GH2 (N = 4), GH3 (N = 6), GH5 (N = 3), GH6 (N = 2), GH7 (N = 4), GH10 (N = 3), GH11 (N = 4), GH12, GH13, GH16 (7), GH17 (N = 2), GH18 (N = 2), GH20, GH24, GH25, GH26, GH27, GH28, GH30 (N = 2), GH31 (N = 2), GH33, GH37, GH43 (N = 8), GH47, GH51, GH53, GH55 (N = 4), GH62 (N = 2), GH67, GH71, GH72 (N = 4), GH75, GH76 (N = 2), GH79 (N = 2), GH81, GH92, GH93 (N = 2), GH95, GH114, GH115 (N = 2)

[224]

Talaromyces emersonii MTCC387

Cellulose (3%) and wheat grain flour (1.5%), 44° C, 250 rpm, 7 days

LC–MS/MS

GH2, GH3 (N = 7), GH5 (N = 3), GH6, GH7 (N = 2), GH10 (N = 2), GH12, GH16 (N = 2), GH43, GH45, GH57, GH81, GH127, GH131

[155]

Podospora anserina

Avicel cellulose/Sugar beet pulp (1%), 27 °C, 100 rpm, 4 days

1D-PAGE

LC–MS/MS

GH2, GH3, GH5, GH6 (N = 2), GH7 (N = 2), GH10, GH15 (N = 2), GH27, GH31, GH37, GH55 (N = 2)

[196]

Laetiporus sulphureus

CMC (2%), 27 °C, 24 days

1D-PAGE

LC–MS/MS

GH2, GH3 (N = 2), GH5, GH7, GH10 (N = 2), GH15, GH16, GH18, GH27 (N = 2), GH31, GH37, GH45, GH55, GH92, GH121

[225]

Pleurotus ostreatus

Sugar cane bagasse (4%), 27 °C, 24 Days

1D-PAGE

LC–MS/MS

GH3 (N = 3), GH5 (N = 2), GH6, GH7 (N = 2), GH10, GH15, GH27 (N = 2), GH47 (N = 2), GH51, GH76 (N = 2), GH92,

[225]

Peniophora sp. CBMAI 1063

Standard medium, 28 °C, 140 rpm, 7 days

1D-PAGE

LC–MS/MS

GH10, GH13 (N = 3), GH15 (N = 3), GH16 (N = 2), GH18 (N = 3), GH20 (N = 2), GH28, GH30 (N = 2), GH31 (N = 3), GH32, GH43 (N = 5), GH51, GH72, GH76 (N = 2), GH78, GH88, GH92 (N = 3), GH95, GH125, GH128

[178]

P. ostreatus

Wheat straw, 28 °C, 21 days

LC–MS/MS

GH1, GH2 (N = 2), GH3 (N = 4), GH5 (N = 3), GH6, GH7 (N = 3), GH10, GH12, GH13, GH15, GH16, GH20 (N = 2), GH27 (N = 2), GH28, GH31, GH35 (N = 2), GH37, GH47 (N = 3), GH51, GH55, GH72, GH76, GH79, GH88, GH105, GH115 (N = 2)

[226]

P. chrysosporium

Wheat straw, 28 °C, 21 days

LC–MS/MS

GH2, GH3 (N = 5), GH5 (N = 7), GH6, GH7 (N = 4), GH10 (N = 5), GH11, GH12, GH13 (N = 2), GH17, GH18 (N = 5), GH20, GH27, GH28 (N = 3), GH30, GH31, GH35, GH37, GH43 (N = 4), GH45, GH47 (N = 3), GH53, GH61 (N = 2), GH71, GH88, GH155

[226]

Irpex lacteus

Corn-step solids growth medium, 28 °C, 21 days

LC–MS/MS

GH2 (N = 2), GH3 (N = 3), GH5 (N = 2), GH7, GH15 (N = 2), GH30, GH31 (N = 2), GH35 (N = 3), GH43, GH92 (N = 2), GH105, GH125

[226]

Irpex lacteus

Wheat straw, 28 °C, 21 days

LC–MS/MS

GH2, GH3 (N = 2), GH5 (N = 2), GH6, GH7 (N = 3), GH10 (N = 2), GH35 (N = 2), GH43, GH57, GH61, GH74, GH92

[226]

D. decipiens oita

Cellulose (1%), 25 °C, 150 rpm, 3 days

LC–MS/MS

GH2 (N = 2), GH3 (N = 6), GH5 (N = 5), GH6, GH7 (N = 4), GH10, GH11 (N = 3), GH13, GH15 (N = 2), GH16 (N = 2), GH17 (N = 2), GH18 (N = 3), GH28 (N = 2), GH29, GH30 (N = 2), GH31, GH32, GH37, GH43 (N = 6), GH45, GH47, GH51, GH55 (N = 3), GH71, GH72 (N = 3), GH74, GH76, GH79 (N = 2), GH92 (N = 2), GH93, GH125

[227]

Trichoderma guizhouense NJAU4742

Rice straw (1%), 28 °C, 170 rpm, 6 days

1D-PAGE

LC–MS/MS

GH1, GH2, GH3, GH5, GH6, GH7, GH10, GH11, GH12, GH13, GH15, GH16, GH17, GH18, GH20, GH23, GH24, GH25, GH27, GH28, GH30, GH31, GH35, GH39, GH43, GH47, GH50, GH54, GH55, GH61, GH62, GH64, GH65, GH67, GH71, GH72, GH74, GH75, GH76, GH79, GH81, GH92, GH95, GH125, GH127, GH128

[228]

Postia placenta

Aspen wafer sections, solid-state fermentation

LC–MS/MS

GH3, GH5 (N = 4), GH10, GH16 (N = 2), GH27, GH28, GH47, GH51, GH55 (N = 3), GH79

[229]

Gloeophyllum trabeum

Aspen wafer sections, solid-state fermentation

LC–MS/MS

GH2, GH3 (N = 3), GH5 (N = 4), GH10 (N = 2), GH12, GH16, GH18, GH20 (N = 2), GH27, GH28 (N = 3), GH31, GH35, GH47, GH51, GH55, GH72, GH79, GH115 (N = 2)

[229]

Trametes versicolor

Aspen wafer sections, solid-state fermentation

LC–MS/MS

GH2, GH3 (N = 4), GH5 (N = 3), GH6, GH7 (N = 4), GH10 (N = 2), GH12 (N = 2), GH18, GH20 (N = 2), GH27, GH28 (N = 3), GH30, GH31, GH35, GH43 (N = 2), GH47, GH51, GH53, GH79, GH92 (N = 2), GH115, GH131

[229]

Stereum hirsutum

Aspen wafer sections, solid-state fermentation

LC–MS/MS

GH3, GH5 (N = 3), GH6, GH7, GH10 (N = 2), GH15 (N = 2), GH18 (N = 3), GH28 (N = 2), GH72, GH75, GH79

[229]

P.chrysosporium RP-78

Avicel cellulose (2%), 37 °C, 150 rpm, 12 days

1D-PAGE

LC–MS/MS

GH5 (N = 4), GH6, GH7 (N = 4), GH10 (N = 4), GH11, GH12, GH15, GH18, GH43 (N = 3), GH28 (N = 2), GH31, GH45, GH55, GH74 (N = 2), GH131

[230]

T. versicolor BAFC 266

Avicel cellulose (2%), 27 °C, 150 rpm, 12 days

1D-PAGE

LC–MS/MS

GH3, GH5 (N = 4), GH6, GH7 (N = 3), GH10 (N = 3), GH12 (N = 2), GH18, GH21, GH30, GH31, GH32, GH43, GH45, GH47, GH51, GH53, GH74, GH78, GH92, GH131(N = 3)

[230]

Chrysoporthe cubensis LPF-1

Wheat bran, semi-solid fermentation, 28 °C, 7 days

1D-PAGE

LC–MS/MS

GH1 (N = 2), GH2 (N = 2), GH3 (N = 9), GH5 (N = 2), GH6 (N = 2), GH7 (N = 3), GH10 (N = 3), GH11 (N = 3), GH12, GH16 (N = 3), GH17 (N = 3), GH27 (N = 3), GH28 (N = 4), GH29 (N = 2), GH35 (N = 2), GH39, GH43 (N = 3), GH45 (N = 2), GH47 (N = 2), GH51, GH54, GH64, GH67, GH71, GH72, GH74, GH78 (N = 4), GH79, GH81, GH93 (N = 3), GH106 (N = 2), GH115, GH128, GH131 (N = 2), GH132, GH140

[142]

Aspergillus clavatus NRRL1

Sugarcane bagasse (1%), 30 °C, 250 rpm, 5 days

1D-PAGE

LC–MS/MS

GH3 (N = 4), GH7 (N = 2), GH5, GH11, GH17, GH27, GH28 (N = 2), GH43, GH62 (N = 2)

[231]

Wolfiporia cocos

Debarked and wiley-milled aspen (0.5%), 5 °C, 150 rpm, 5 days

1D-PAGE

LC–MS/MS

GH3 (N = 2), GH5 (N = 3), GH10 (N = 2), GH15, GH16, GH18 (N = 2), GH28, GH51, GH79, GH115 (N = 2), GH125

[232]

Ceriporiopsis subvermispora strain B

Ball-milled bigtooth aspen (0.5%), 26.5 °C, 150 rpm, 3, 5 and 7 days

LC–MS/MS

GH2 (N = 2), GH3 (N = 2), GH5 (N = 8), GH6, GH7 (N = 2), GH10 (N = 6), GH12, GH13 (N = 2), GH15 (N = 2), GH16 (N = 6), GH18 (N = 4), GH20 (N = 2), GH27 (N = 2), GH28 (N = 2), GH30, GH3 (N = 3), GH37, GH43, GH47, GH51, GH55 (N = 2), GH72, GH74, GH78, GH79 (N = 2), GH88, GH89, GH92 (N = 3), GH95, GH115 (N = 2)

[233]