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Fig. 1 | Biotechnology for Biofuels and Bioproducts

Fig. 1

From: Boosting the acetol production in methanotrophic biocatalyst Methylomonas sp. DH-1 by the coupling activity of heteroexpressed novel protein PmoD with endogenous particulate methane monooxygenase

Fig. 1

Bioinformatic analysis of the novel protein PmoD (GenBank accession number QSR88567) from Methylacidiphilum sp. IT6. A Multiple sequence alignment of the protein PmoD with reference protein sequences conducted using Clustal Omega [33] and viewed in Jalview program [34] with necessary annotations. The GenBank accession numbers of all reference sequences are displayed on the left of corresponding sequences. ACD83552.1: PmoD5 of Methylacidiphilum infernorum V4; WP_206826270.1: PmoD of Methylacidiphilum sp. IT6; MEALZ 0105: PmoD of Methylotuvimicrobium alcaliphilum 20Z; Met49242-1452: PmoD of Methylocystis sp. strain Rockwell; QDQ42582.1: PmoD3 of M. kamchatkense Kam1; QDQ42725.1: PmoD5 of M. kamchatkense Kam1; TFE69115.1: PmoD3 of M. fumariolicum strain SolV; WP_003610847.1: pmoD of Methylosinus trichosporium OB3b; WP_009059622: PmoD5 of M. fumariolicum strain SolV; WP_048810247.1: PmoD3 of M. infernorum V4. B Phylogenetic analysis of the novel protein PmoD with reference proteins. The phylogenetic tree was constructed using the Maximum Likelihood method with the Jones–Taylor–Thornton (JTT) matrix-based model and 500-replicate bootstrap [35]. C Predicted protein structures of PmoD of Methylacidiphilum sp. IT6 using InterProScan [25]

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Biotechnology for Biofuels and Bioproducts

ISSN: 2731-3654

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