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Table 5 Target sequences used in yeast transformation

From: Screening novel genes by a comprehensive strategy to construct multiple stress-tolerant industrial Saccharomyces cerevisiae with prominent bioethanol production

Target

Sequence

gRNA insert

 

 tgR-F

TGCGCATGTTTCGGCGTTCGAAACTTCTCCGCAGTGAAAGA

TAAATGATC

 tgR-R

GTTGATAACGGACTAGCCTTATTTTAACTTGCTATTTCTAGC

TCTAAAAC

 ENA5

CS

GATAACGTATGTACTCACTGAGG

 CRZ1

CS

GCAGAATGTCTACTACGTCGAGG

 ASP3

CS

GCTACGGCATGGATCAGATTAGG

 TOS8

CS

AGAAATTACATAATAACTGTAGG

 YOL162W

CS

AAGGTACAATGTTTAATAAATGG

 YOR012W

CS

TTGAAACTTTTTCAGTGATTGGG

Repair fragment

 TEF1

F

CACACACCATAGCTTCAAAATG

 

R

TTTGTAATTAAAACT

 ENA5

RF F

CCTTCATCCTTTACATCGAGAATACGTTAACCAAATCAACCACACACCATAGCTTCAAAATG

 

RF R

ATTCTTCATTATTGTTTTCTTTGACAGTTCCCTCGCTCATTTTGTAATTAAAACT

 

VP F

TTGTGAGGCTGATGTTTTCTTC

 

VP R

GCTTCTTCTGTAGTCAATGTGTGAT

 CRZ1

RF F

GGGCTGAAAAGTACATCCGCGCATTTAACAATTGCTAAGCCACACACCATAGCTTCAAAATG

 

RF R

TAGTCATGTAGGAAGCCATATTTCCGTTGCTGAATGACATTTTGTAATTAAAACT

 

VP F

GCTTTGACTGCACTTTAGCTTAG

 

VP R

TTTCCGTTGCTGAATGACAT

 ASP3

RF F

AGAGCAAATGTTGGCTCGCTATTCTTTTGTAAGCAATCTGGTACTCACCAACCTCCAACTAGCCTGATCAGTGACTTTTCATCACACTGTGTTTTTATATAGTTCTTAGTAGTAAATATA

 

RF R

TATATTTACTACTAAGAACTATATAAAAACACAGTGTGATGAAAAGTCACTGATCAGGCTAGTTGGAGGTTGGTGAGTACCAGATTGCTTACAAAAGAATAGCGAGCCAACATTTGCTCT

 

VP F

TATCAGACCCTTCAGCACGT

 

VP R

TGACACTGCTCAAGGGATAA

 TOS8

RF F

TTTTTCAGTATAGGAAGTAATCACTGTAGAAATAAGTCAACAATAATTGCATAGAAAAAATTTTACTTTTTTCGGAATTACCTAAAATGGGTTTACGGCATAGAAGATAGATAGATTAAG

 

RF R

CTTAATCTATCTATCTTCTATGCCGTAAACCCATTTTAGGTAATTCCGAAAAAAGTAAAATTTTTTCTATGCAATTATTGTTGACTTATTTCTACAGTGATTACTTCCTATACTGAAAAA

 

VP F

GTTCCCTTGTTTTGAAGCAC

 

VP R

CGAAGATTCTCACCAAAGTT

 YOL162W

RF F

ATGTCACTTAAAATGTTATGGCAGGGGATAACAGATTACTATATATAGCCTATCTACTTGACTATGTAGAAATATGGATACAATCTCCATGTTATGTATTTTTTAAGTTTGTGAATCATT

 

RF R

AATGATTCACAAACTTAAAAAATACATAACATGGAGATTGTATCCATATTTCTACATAGTCAAGTAGATAGGCTATATATAGTAATCTGTTATCCCCTGCCATAACATTTTAAGTGACAT

 

VP F

CTAAGCAATCACCTAAACAT

 

VP R

GATGTCGTACTTCTACAGCT

YOR012W

RF F

GAAAAAGGCAGTGACAAAAATACTAATCAGAACGTTGAAAACAAATCAATAGTTTTGATACCATCCCGAAATTAGAGGTTCAGTCAGAAAAATACTCGAAAAATATAAAACCAAAGCAGA

 

RF R

TCTGCTTTGGTTTTATATTTTTCGAGTATTTTTCTGACTGAACCTCTAATTTCGGGATGGTATCAAAACTATTGATTTGTTTTCAACGTTCTGATTAGTATTTTTGTCACTGCCTTTTTC

 

VP F

TGCCTCATAACGTCTTGGGG

 

VP R

GTAGGCCGTGAATCCCTTCC

  1. tgR-F: upstream homologous of gRNA; tgR-R: downstream homologous of gRNA; CS: complementary sequence; RF: repair fragment; Vp: verification primer; F: forward primer; R: reverse primer, “double underline” represent the PAM (NGG) site, “underline” represent homologous arm