Fig. 1
From: Regulation of seed oil accumulation by lncRNAs in Brassica napus
Identification of lncRNAs at 10 d, 24 d, and 34 DAF seeds of B. napus ZS11 (high oil content) and WH5557 (low oil content). A The Venn diagram shows the number of lncRNAs obtained by Coding–Non-Coding Index (CNCI) analysis, Coding Potential Calculator (CPC) analysis, PFAM protein structural domain analysis, Coding Potential Assessment Tool (CPAT). B Pie chart shows the different types of lncRNAs. C The analysis of t-SNE of mRNA-seq and lncRNA-seq in different developing seeds. Different color dots representation of different seed stages in two accessions. The same color dots representation of three replicates in each seed stage of the same accession. D Comparison of differentially expression levels of lncRNA and mRNA normalized using a formula of log2 (FPKM + 1). *** denote significance at P < 0.001 based on the student’s t-test. E The proportion of the different exon number of lncRNA and mRNA in transcripts. F The transcript length distribution of lncRNA and mRNA