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Table 2 Genes predicted to encode proteins of different CAZy classes and their numbers within the genome of members of the SWT consortium

From: Functioning of a tripartite lignocellulolytic microbial consortium cultivated under two shaking conditions: a metatranscriptomic study

CAZy

Activity

Substrate

2T2.1

w15

so4

References

AA16

LCMOa

Cellulose

6

0

0

 

GH16

Glucanase

Cellulose

40

10

0

[5, 16], H-Tb

GH32

β-Fructofuranosidase

Fructan

9

3

2

 

GH128

β-1,3-Glucanase

Cellulose

8

0

0

[16], H-T

GH5

Endo-glucanase

Cellulose

36

1

2

[3]

GH71

α-1,3-Glucanase

Cellulose

13

0

0

[4]

GH7

Cellobiohydrolase

Cellulose

12

0

0

[4, 16], H-T

AA9

LCMO

Cellulose

38

0

0

H-T

GH10

Xylanase

Hemic

14

2

0

H-T

GH11

Endo-β-xylanase

Hemi

13

0

0

[4, 16]

GH30

Endoxylanase

Hemi

10

3

0

[3, 16]

CE1

Acetyl xylan esterase

Hemi

21

11

2

[4, 16]

CE5

Acetyl xylan esterase

Hemi

14

0

0

H-T

GH43

β-Xylosidase/α-L-arabinofuranosidase

Hemi

40

17

1

[4, 5, 16], H-T

GH93

Exo-α-L-1,5-arabinanase

Hemi

6

0

0

[4, 16]

GH3

β-Xylosidase/β-glucosidase

NA

28

6

4

[4, 5]

GH1

β-Glucosidase/galactosidase

NA

4

1

4

[5, 16]

GH51

α-L-Arabinofuranosidase

Hemi

4

3

0

[4, 16]

GH62

α-L-Arabinofuranosidase

Hemi

3

0

0

[4, 16]

GH29

α-L-Fucosidase

NA

0

16

0

[5]

GH95

Fucosidase/galactosidase

NA

2

10

0

[5]

GH2

β-Galactosidase

NA

12

20

2

[5]

GH27

α-Galactosidase

NA

6

0

0

H-T

GH92

α-Mannosidase

NA

8

10

0

[3, 5]

GH74

Xyloglucanase

Hemi

2

0

0

 

AA3

 

Lignin

9

4

0

 

AA3_2

AAOd/glucose oxidase

Lignin/cellulose

19

0

0

[4, 16]

CE15

Lignin esterase

Lignin

7

0

0

 

AA1_3

Laccase

Lignin

5

0

0

[4]

AA1_2

Laccase

Lignin

5

0

0

[4]

AA3_3

Alcohol oxidase

Lignin

5

0

0

[16]

GH23

Peptidoglycan lyase

NA

0

2

6

 

GH73

Peptidoglycan hydrolase

NA

0

2

2

 

GH79

β-Glucuronidase

Proteoglycan

7

0

0

[4]

GH67

α-Glucuronidase

Proteoglycan

2

1

0

 

GH88

β-Glucuronyl hydrolase

Proteoglycan

7

5

2

 

GH13

α-Amylase

Starch

25

6

6

 
  1. a: LCMO: lytic cellulose monooxygenase; b: H-T: high TPM in Coniochaeta sp. 2T2.1; c: Hemi: hemicellulose; d: AAO: aryl alcohol oxidase