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Table 5 The number of CAZymes and non-CAZy proteins from P. parvum resulting from genome prediction and secretome analysis

From: Insights into the capability of the lignocellulolytic enzymes of Penicillium parvum 4-14 to saccharify corn bran after alkaline hydrogen peroxide pretreatment

Classification

Family

In genome

In secretome

All

With SPa

All

With SP

E_CBAX1

E_CBR

CAZymes

GH

221

124

108

92

100

107

 

CE

14

10

6

5

5

6

 

PL

3

3

2

2

1

2

 

AA

44

19

3

3

2

3

 

GT

94

0

0

0

0

0

 

CBMb

28

21

17

14

16

16

 

Sum

376

156

119

102

108

118

Non-CAZy proteins

 

8521

–

210

–

155

198

  1. GH glycoside hydrolase, CE carbohydrate esterase, PL polysaccharide lyase, AA auxiliary activity, GT glycosyltransferase, CBM carbohydrate-binding module
  2. aPrediction of signal peptide (SP) was performed using SignalP6.0 [71];
  3. bCAZymes harbouring a CBM domain; –, no analysis
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Biotechnology for Biofuels and Bioproducts

ISSN: 2731-3654

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