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Table 1 Growth rates, substrate uptake rates, product excretion rates, ATP maintenance rate, product yields, and volumetric iBuOH productivity for strains SB001-pIBA4 and RL3000Δferm-pIBA4 cultivated anaerobically in minimal medium with (+ Ace) and without (−Ace) acetate

From: Growth-coupled anaerobic production of isobutanol from glucose in minimal medium with Escherichia coli

 

SB001-pIBA4 (+ Ace) experimental

SB001-pIBA4 (+ Ace)

FBA

SB001-pIBA4

(−Ace)

experimental

RL3000∆ferm-pIBA4 (+ Ace)

experimental

RL3000∆ferm-pIBA4 (−Ace)

experimental

µ

[h−1]

0.051 ± 0.001

0.051 (fixed)

 ~ 0

 ~ 0

 ~ 0

rGlc_up

[mmol gDW−1 h−1]

4.80 ± 0.06

4.80 (fixed)

2.46 ± 1.33

1.15 ± 0.28

2.42 ± 0.99

rIso_ex

[mmol gDW−1 h−1]

4.36 ± 0.04

4.36 (fixed)

1.60 ± 0.16

1.14 ± 0.02

1.61 ± 0.08

rAce_up

[mmol gDW−1 h−1]

1.18 ± 0.10

1.18 (fixed)

 ~ 0

 ~ 0

 ~ 0

rEth_ex

[mmol gDW−1 h−1]

1.15 ± 0.02

0.93 (calculated)

 ~ 0

 ~ 0

 ~ 0

rCO2_ex

[mmol gDW−1 h−1]

n.d

9.77 (calculated)

n.d

n.d

n.d

rATPM

[mmol gDW−1 h−1]

n.d

4.05 (calculated)

n.d

n.d

n.d

YIso/Glc

[mol mol−1]

0.89 ± 0.02

0.91 (fixed by given rates)

0.60 ± 0.16

0.67 ± 0.21

0.70 ± 0.38

YEth/Ace

[mol mol−1]

0.96 ± 0.05

0.79 (calculated)

n.d

n.d

n.d

YBM/Glc

[gDW g−1]

0.057 ± 0.001

0.059 (calculated)

 ~ 0

 ~ 0

 ~ 0

qIso (2–48 h)

[mmol L−1 h−1]

1.33 ± 0.03

(n.d. by FBA)

0.14 ± 0.00

0.08 ± 0.00

0.15 ± 0.01

  1. Columns indicated with “experimental” display measured data, while the column indicated with “FBA” displays results from flux balance analysis where the measured rates indicated with “fixed” were used as input for calculating the fluxes indicated as “calculated”. For the calculation of unknown rates, it was assumed that the substrate not used for growth was utilized to synthesize ATP for non-growth-associated maintenance (rATPM). The means ± s.d. of n = 3 biologically independent samples are shown. Note that the measured yields may deviate from the respective ratios of measured rates because yields were determined from the final product concentration at the end of the cultivation while rates were calculated for the exponential phase. The volumetric productivity of iBuOH (qIso) was calculated for the time interval 2–48 h for each cultivation