Skip to main content

Table 2 Strains, plasmids, and primers used in this study

From: Growth-coupled anaerobic production of isobutanol from glucose in minimal medium with Escherichia coli

Strain or plasmid

Description

Reference

RL3000Δferm

E. coli MG1655 ilvG+ rph+ rfb-50 ybhJ(L54→I) yebN(G25→D) ycfK::97 bp. ΔinsB-5 ΔinsA-5 ΔinsAB-5 ΔackA ΔfrdA ΔldhA ΔadhE ΔilvC ΔlacY

[19]

LJ110

E. coli W3110 Fnr+

[57]

LK3S

LJ110 ΔldhA ΔpflB

Lab collection

SB001

LJ110 ΔldhA ΔpflB ΔfrdA

This study

RL3000Δferm-pIBA4

RL3000Δferm transformed with plasmid pIBA4

[19]

SB001-pIBA4

SB001 transformed with plasmid pIBA4

This study

pIBA4

Expression plasmid encoding the iBuOH pathway

[pBBRori-aadA1(SpR)-TL-lacI-PlacIq] (814bb)-PT7A1-O34-RBSAS7-alsSBsu-RBSAC7-ilvCEco-6E6-RBSAD5-ilvDEco-RBSAK7-kivdLla-RBSAA2-adhALla-M5-gfp-TP22

[19]

pKD4

Template plasmid for generation of deletion cassette

[56]

Primer name

Sequence (5ʹ-3ʹ)

 P1_frdA_fw

CAAACCTTTCAAGCCGATCTTGCCATTGTAGGCGCCGTGTAGGCTGGAGCTGCTTCG

 P2_frdA_rv

CGCCTTCTCCTTCTTATTGGCTGCTTCCGCCTTATCCATATGAATATCCTCCTTA