Fig. 2
Schematic representation of proteins and pathways differentially enriched in Mut-5 vs CC-125. 73/242 proteins with significantly higher (blue) or lower (red) abundance in Mut-5 vs CC-125 are shown (Log2 fold change > 1 or < 1; adjusted p-value < 0.05). Pathways coloured blue/red were significantly more/less enriched in Mut-5 vs CC-125, respectively. Values indicate the mean (n = 3) Mut-5/CC-125 Log2-transformed fold change for each protein. PSII/PSI, photosystem II/I; Cyt b6f, cytochrome b6f; ATP syn, ATP synthase; (P)Q, (plasta)quinone; PSII aux, PSII auxiliary proteins; qE NPQ, energy-dependent non-photochemical quenching; CCM, carbon-concentrating mechanism; Chl biosynth, chlorophyll biosynthesis; Car biosynth, carotenoid biosynthesis; FLVA, Flavodiiron protein-A; psbF/PSBP3/PSB27/PSB28/PSBS2, PSII subunits; CPLD49, Conserved in the Plant Lineage and Diatoms-49; pafII, PSI assembly factor-II; ELIP8, early light-inducible protein-8; OHP2, ONE-HELIX PROTEIN-2; HCF244/173/136, HIGH CHLOROPHYLL FLUORESCENCE-244/173/136; TEF5/30/8, thylakoid lumenal protein-5/30/8; HHL1, hypersensitive to high light-1; APE1, acclimation of photosynthesis to environment 1; CYN38, cyclophilin-38; REP27, repair protein 27; DEG1A/1C, degradation of periplasmic proteins protease-1A/1C; FTSH1/2, filamentation temperature-sensitive-1/2; SECA1, sorting factor-A1; ALB3.2, ALBINO3-like translocon protein-3.2; LHCSR1/3, light-harvesting complex stress-related protein-1/3; CAH3/5, carbonic anhydrase-3/5; PDS1, phytoene desaturase-1; AOF8, flavin-containing amino oxidase-8; VDE, violaxanthin de-epoxidase; CHLD/I2, magnesium-protoporphyrin IX chelatase subunit D/I2; PLAP(s), plastid lipid-associated protein(s); FAS2/3, fasciclin-like protein-2/3; AMA3, alpha-amylase-3; STA3, soluble starch synthase III; G6P, glucose 6-phosphate; F6P, fructose 6-phosphate; F1,6BP, Fructose-1,6-bisphosphate; FBP1, Fructose-1,6-bisphosphatase-1; DHAP, Dihydroxyacetone phosphate; SBP, sedoheptulose-1,7-bisphosphate; Ru5P, ribulose 5-phosphate; RuBP, Ribulose-1,5-bisphosphate; 3PGA, 3-phosphoglycerate; GAPC1, chloroplastic glyceraldehyde-3-phosphate dehydrogenase-1; FAD4, fatty acid desaturase-4; CGL76; conserved in the green lineage-76; TGL1, triacylglycerol lipase-1; MSD3, manganese superoxide dismutase-3; TRXx, thioredoxin x; MDAR1, monodehydroascorbate reductase; GRX1/2, glutaredoxin-1/2; GPX5/3, glutathione peroxidase-1/3; AST1, Aspartate aminotransferase; IDH3, Isocitrate dehydrogenase-3; OGD1, 2-oxoglutarate dehydrogenase subunit-E1; SCLA1, Succinyl-CoA ligase α-chain; FUM1, Fumarate hydratase; NUOAF4/S1, NADH:ubiquinone oxidoreductase subunit AF4/S1; TIM17/22, translocase of the inner membrane-17/22; TOM40, 40 kDa translocon at mitochondrial outer envelope membrane; ACS1/2/3, Acetyl-coenzyme A synthetase-1/2/3; CIS2, citrate synthase-2; ICL1, isocitrate lyase-1; MAS1, malate synthase-1; BCC1, Acetyl-coenzyme A biotin carboxyl carrier; PCK1, Phosphoenolpyruvate carboxykinase-1