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Table 3 Plasmids and strains

From: Metabolic engineering of a stable haploid strain derived from lignocellulosic inhibitor tolerant Saccharomyces cerevisiae natural isolate YB-2625

Plasmid

Description

References

HO-poly-KanMX4-HO

Vector for targeted integration at the HO locus

[36]

pRS416

pBluescript II SK + , URA3, CEN6, ARSH4

[42]

pRH274

pRS416 + PPGK1-XYL1-TPGK1; PADH1-XYL2-TADH1; PHXT7-XKS1-THXT7

[43]

pRH277

HO-poly-KanMX4-HO + PPGK1-XYL1-TPGK1; PADH1-XYL2-TADH1; PHXT7-XKS1-THXT7

[35]

pRH1015

PRS416 + [pho13 homology]—PPGK1-XYL1-TPGK1; PADH1-XYL2-TADH1; PHXT7-XKS1-THXT7—[pho13 homology]

This study

Strains

Genotype

References

BY4741

MATa ura3Δ0 leu2Δ0 his3Δ1 met15Δ0

[18]

CEN.PK2-1C

MATa ura3-52 trp1-289 leu2-3_112 his3Δ1 MAL2-8C SUC2

EUROSCARF

YB-2625

S. cerevisiae Diploid isolated from bagasse

ARSa

YRH1943

MAT a Haploid 1B isolated from YB-2625 Tetrad #1

This study

YRH1944

MAT alpha Haploid 2A isolated from YB-2625 Tetrad #2

This study

YRH1945

MAT alpha Haploid 3B isolated from YB-2625 Tetrad #3

This study

YRH1946

MAT alpha Haploid 4B isolated from YB-2625 Tetrad #4

This study

YRH2066

YRH1946 pho13∆::PPGK1-XYL1-TPGK1; PADH1-XYL2-TADH1; PHXT7-XKS1-THXT7

This study

YRH2073

BY4741 pho13∆::PPGK1-XYL1-TPGK1; PADH1-XYL2-TADH1; PHXT7-XKS1-THXT7

This study

YRH2074

CEN.PK2-1C pho13∆::PPGK1-XYL1-TPGK1; PADH1-XYL2-TADH1; PHXT7-XKS1-THXT7

This study

YRH2121

YRH1946 ho∆::PPGK1-XYL1-TPGK1; PADH1-XYL2-TADH1; PHXT7-XKS1-THXT7; KanMX

This study

  1. a Strains were obtained from the ARS Culture Collection at the National Center for Agricultural Utilization Research, Peoria, IL, USA