Skip to main content

Advertisement

Table 4 Quantitative comparison of transcriptomic and proteomic analyses *

From: Integrated OMICS guided engineering of biofuel butanol-tolerance in photosynthetic Synechocystissp. PCC 6803

Gene ID Transcriptomics analysis (fold change) Proteomics analysis (fold change) Description
  Butanol vs. Control at 24 h Butanol vs. Control at 48 h Butanol vs.Control at 72 h Butanol vs.Control at 24 h Butanol vs.Control at 48 h  
sll0135 1.64 1.61 2.51   2.42 5′-methylthioadenosine phosphorylase
slr1390 1.83 1.62 2.74   1.52 Cell division protein FtsH
sll1796 3.70 2.38 9.75 3.80 2.91 Cytochrome C553
slr0093 2.61 1.53 2.61   1.93 DnaJ protein
slr1330 3.18 2.11 5.69 1.86   F0F1 ATP synthase subunit epsilon
slr1828 3.38 3.33 11.00 2.09 1.66 ferredoxin
sll0248 3.60 3.67 1.86 1.59 6.26 Flavodoxin FldA
sll0335 1.64 4.33 1.75   1.52 Hypothetical protein
sll0470 4.27 1.55 2.84   1.67 Hypothetical protein
sll1618 1.63 2.71 1.86 1.53 1.67 Hypothetical protein
sll1895 2.23 1.69 2.31   1.59 Hypothetical protein
slr0643 2.13 1.69 2.25 1.52 1.88 Hypothetical protein
slr1046 1.86 1.75 1.50 1.57   Hypothetical protein
ssl0242 2.63 2.53 2.47 1.79 1.66 Hypothetical protein
ssl0352 2.30 2.60 6.33 1.62 1.84 Hypothetical protein
sll0689 2.21 1.63 3.28 1.70 1.93 Na/H + antiporter
slr1755 1.97 1.85 3.44 1.56   NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
  1. * Proteomics data from Tian et al., (2012), in which only proteomes at 24 and 48 h were measured. The fold changes of proteomics data are average of replicates.