Popp J, Lakner Z, Harangi-Rákos M, Fári M. The effect of bioenergy expansion: Food, energy, and environment. Renew Sustain Energy Rev. 2014;32:559–78.
Article
Google Scholar
Warner KJ, Jones GA. A population-induced renewable energy timeline in nine world regions. Energy Policy. 2017;101:65–76.
Article
Google Scholar
IRENA. Global energy transformation: a roadmap to 2050. Abu Dhabi: International Renewable Energy Agency; 2018.
Google Scholar
Marinas MC, Dinu M, Socol AG, Socol C. Renewable energy consumption and economic growth. Causality relationship in central and eastern European countries. PLoS ONE. 2018;13:e0202951.
Article
PubMed
PubMed Central
CAS
Google Scholar
Xie F, Liu C, Chen H, Wang N. Threshold effects of new energy consumption transformation on economic growth. Sustainability. 2018;10:4124.
Article
Google Scholar
Yuan JS, Tiller KH, Al-Ahmad H, Stewart NR, Stewart CN. Plants to power: bioenergy to fuel the future. Trends Plant Sci. 2008;13:421–9.
Article
CAS
PubMed
Google Scholar
Caspeta L, Buijs NAA, Nielsen J. The role of biofuels in the future energy supply. Energy Environ Sci. 2013;6:1077–82.
Article
CAS
Google Scholar
Ben-Iwo J, Manovic V, Longhurst P. Biomass resources and biofuels potential for the production of transportation fuels in Nigeria. Renew Sustain Energy Rev. 2016;63:172–92.
Article
Google Scholar
Halford NG, Karp A. Energy crops. London: Royal Society of Chemistry; 2010.
Book
Google Scholar
Gavrilescu M. Biorefinery systems: an overview. In: Gupta VK, Tuohy MG, Kubicek CP, Saddler J, Xu F, editors. Bioenergy research: advances and applications. Amsterdam: Elsevier; 2014. p. 219–41.
Chapter
Google Scholar
Loqué D, Scheller HV, Pauly M. Engineering of plant cell walls for enhanced biofuel production. Curr Opin Plant Biol. 2015;25:151–61.
Article
PubMed
CAS
Google Scholar
Amore A, Ciesielski PN, Lin C-Y, Salvachúa D. Sànchez i Nogué V: Development of lignocellulosic biorefinery technologies: recent advances and current challenges. Aust J Chem. 2016;69:1201–18.
Article
CAS
Google Scholar
Carroll A, Somerville C. Cellulosic biofuels. Annu Rev Plant Biol. 2009;60:165–82.
Article
CAS
PubMed
Google Scholar
Naik SN, Goud VV, Rout PK, Dalai AK. Production of first and second generation biofuels: a comprehensive review. Renew Sustain Energy Rev. 2010;14:578–97.
Article
CAS
Google Scholar
Hirani AH, Javed N, Asif M, Basu SK, Kumar A. A review on first- and second-generation biofuel productions. In: Kumar A, Ogita S, Yau Y-Y, editors. Biofuels: greenhouse gas mitigation and global warming: next generation biofuels and role of biotechnology. New Delhi: Springer India; 2018. p. 141–54.
Google Scholar
Nageswara-Rao M, Soneji JR, Kwit C, Stewart CN. Advances in biotechnology and genomics of switchgrass. Biotechnol Biofuels. 2013;6:77.
Article
CAS
PubMed
PubMed Central
Google Scholar
McLaughlin SB, Adams Kszos L. Development of switchgrass (Panicum virgatum) as a bioenergy feedstock in the United States. Biomass Bioenerg. 2005;28:515–35.
Article
Google Scholar
Brosse N, Dufour A, Meng X, Sun Q, Ragauskas A. Miscanthus: a fast-growing crop for biofuels and chemicals production. Biofuels Bioprod Biorefin. 2012;6:580–98.
Article
CAS
Google Scholar
Mathur S, Umakanth AV, Tonapi VA, Sharma R, Sharma MK. Sweet sorghum as biofuel feedstock: recent advances and available resources. Biotechnol Biofuels. 2017;10:146.
Article
PubMed
PubMed Central
Google Scholar
Sannigrahi P, Ragauskas AJ, Tuskan GA. Poplar as a feedstock for biofuels: a review of compositional characteristics. Biofuels Bioprod Biorefin. 2010;4:209–26.
Article
CAS
Google Scholar
Krzyżaniak M, Stolarski MJ, Waliszewska B, Szczukowski S, Tworkowski J, Załuski D, Śnieg M. Willow biomass as feedstock for an integrated multi-product biorefinery. Ind Crops Prod. 2014;58:230–7.
Article
CAS
Google Scholar
Albersheim P, Darvill A, Roberts K, Sederoff R, Staehelin A. Plant cell walls. New York: Garland Science; 2010.
Book
Google Scholar
Zeng Y, Himmel ME, Ding S-Y. Visualizing chemical functionality in plant cell walls. Biotechnol Biofuels. 2017;10:263–263.
Article
PubMed
PubMed Central
CAS
Google Scholar
Kumar P, Barrett DM, Delwiche MJ, Stroeve P. Methods for pretreatment of lignocellulosic biomass for efficient hydrolysis and biofuel production. Ind Eng Chem Res. 2009;48:3713–29.
Article
CAS
Google Scholar
Sluiter A, Hames B, Ruiz R, Scarlata C, Sluiter J, Templeton D, Crocker D: Determination of structural carbohydrates and lignin in biomass. Laboratory analytical procedure 2012: NREL/TP-510–42618.
Kim JS, Lee YY, Kim TH. A review on alkaline pretreatment technology for bioconversion of lignocellulosic biomass. Biores Technol. 2016;199:42–8.
Article
CAS
Google Scholar
Teymouri F, Laureano-Perez L, Alizadeh H, Dale BE. Optimization of the ammonia fiber explosion (AFEX) treatment parameters for enzymatic hydrolysis of corn stover. Biores Technol. 2005;96:2014–8.
Article
CAS
Google Scholar
Jacquet N, Maniet G, Vanderghem C, Delvigne F, Richel A. Application of steam explosion as pretreatment on lignocellulosic material: a review. Ind Eng Chem Res. 2015;54:2593–8.
Article
CAS
Google Scholar
Zhuang X, Wang W, Yu Q, Qi W, Wang Q, Tan X, Zhou G, Yuan Z. Liquid hot water pretreatment of lignocellulosic biomass for bioethanol production accompanying with high valuable products. Biores Technol. 2016;199:68–75.
Article
CAS
Google Scholar
Kumar P, Barrett DM, Delwiche MJ, Stroeve P. Pulsed electric field pretreatment of switchgrass and wood chip species for biofuel production. Ind Eng Chem Res. 2011;50:10996–1001.
Article
CAS
Google Scholar
Golberg A, Sack M, Teissie J, Pataro G, Pliquett U, Saulis G, Stefan T, Miklavcic D, Vorobiev E, Frey W. Energy-efficient biomass processing with pulsed electric fields for bioeconomy and sustainable development. Biotechnol Biofuels. 2016;9:94–94.
Article
PubMed
PubMed Central
Google Scholar
Ciesielski PN, Resch MG, Hewetson B, Killgore JP, Curtin A, Anderson N, Chiaramonti AN, Hurley DC, Sanders A, Himmel ME, et al. Engineering plant cell walls: tuning lignin monomer composition for deconstructable biofuel feedstocks or resilient biomaterials. Green Chem. 2014;16:2627–35.
Article
CAS
Google Scholar
Boufi S. Agricultural crop residue as a source for the production of cellulose nanofibrils. In: Cellulose-reinforced nanofibre composites. New York: Elsevier; 2017. p. 129–52.
Chapter
Google Scholar
Himmel ME, Ding S-Y, Johnson DK, Adney WS, Nimlos MR, Brady JW, Foust TD. Biomass recalcitrance: engineering plants and enzymes for biofuels production. Science. 2007;315:804–7.
Article
CAS
PubMed
Google Scholar
Zeng Y, Zhao S, Yang S, Ding S-Y. Lignin plays a negative role in the biochemical process for producing lignocellulosic biofuels. Curr Opin Biotechnol. 2014;27:38–45.
Article
CAS
PubMed
Google Scholar
Mahon EL, Mansfield SD. Tailor-made trees: engineering lignin for ease of processing and tomorrow’s bioeconomy. Curr Opin Biotechnol. 2019;56:147–55.
Article
CAS
PubMed
Google Scholar
McLaughlin S, Bouton J, Bransby D, Conger B, Ocumpaugh W, Parrish D, Taliaferro C, Vogel K, Wullschleger S. Developing switchgrass as a bioenergy crop. Perspect N Crops N Uses. 1999;56:282–99.
Google Scholar
Cox C, Garrett K, Bockus W. Meeting the challenge of disease management in perennial grain cropping systems. Renewable Agric Food Syst. 2005;20:15–24.
Article
Google Scholar
Wright L. Historical perspective on how and why switchgrass was selected as a “model” high-potential energy crop; 2007.
Casler MD, Tobias CM, Kaeppler SM, Buell CR, Wang Z-Y, Cao P, Schmutz J, Ronald P. The switchgrass genome: tools and strategies. Plant Genome. 2011;4:273–82.
Article
CAS
Google Scholar
Fike JH, Pease JW, Owens VN, Farris RL, Hansen JL, Heaton EA, Hong CO, Mayton HS, Mitchell RB, Viands DR. Switchgrass nitrogen response and estimated production costs on diverse sites. GCB Bioenergy. 2017;9:1526–42.
Article
CAS
Google Scholar
Hendrickson J, Schmer MR, Sanderson MA. Water use efficiency by switchgrass compared to a native grass or a native grass alfalfa mixture. BioEnergy Res. 2013;6:746–54.
Article
Google Scholar
Lin CY, Donohoe BS, Ahuja N, Garrity DM, Qu R, Tucker MP, Himmel ME, Wei H. Evaluation of parameters affecting switchgrass tissue culture: toward a consolidated procedure for Agrobacterium-mediated transformation of switchgrass (Panicum virgatum). Plant Methods. 2017;13:113.
Article
PubMed
PubMed Central
CAS
Google Scholar
Pedroso GM, De Ben C, Hutmacher RB, Orloff S, Putnam D, Six J, van Kessel C, Wright SD, Linquist B. Switchgrass is a promising, high-yielding crop for California biofuel. Calif Agric. 2011;65:168–73.
Article
Google Scholar
Guretzky JA, Biermacher JT, Cook BJ, Kering MK, Mosali J. Switchgrass for forage and bioenergy: harvest and nitrogen rate effects on biomass yields and nutrient composition. Plant Soil. 2011;339:69–81.
Article
CAS
Google Scholar
O’Bryan PJ, Hector RE, Iten LB, Mitchell RB, Qureshi N, Sarath G, Vogel KP, Cotta MA. Conversion of switchgrass to ethanol using dilute ammonium hydroxide pretreatment: influence of ecotype and harvest maturity AU – Dien, Bruce S. Environ Technol. 2013;34:1837–48.
Article
PubMed
CAS
Google Scholar
Ashworth AJ, Sadaka SS, Allen FL, Sharara MA, Keyser PD. Influence of pyrolysis temperature and production conditions on switchgrass biochar for use as a soil amendment. BioResources. 2014;9:7622–35.
Article
Google Scholar
Karp EM, Resch MG, Donohoe BS, Ciesielski PN, O’Brien MH, Nill JE, Mittal A, Biddy MJ, Beckham GT. Alkaline pretreatment of switchgrass. ACS Sustain Chem Eng. 2015;3:1479–91.
Article
CAS
Google Scholar
Bahri BA, Daverdin G, Xu X, Cheng J-F, Barry KW, Brummer EC, Devos KM. Natural variation in genes potentially involved in plant architecture and adaptation in switchgrass (Panicum virgatum L.). BMC Evol Biol. 2018;18:91.
Article
PubMed
PubMed Central
CAS
Google Scholar
Abramson M, Shoseyov O, Shani Z. Plant cell wall reconstruction toward improved lignocellulosic production and processability. Plant Sci. 2010;178:61–72.
Article
CAS
Google Scholar
Xi Y, Fu C, Ge Y, Nandakumar R, Hisano H, Bouton J, Wang Z-Y. Agrobacterium-mediated transformation of switchgrass and inheritance of the transgenes. Bioenergy Res. 2009;2:275–83.
Article
Google Scholar
Chen F, Dixon RA. Lignin modification improves fermentable sugar yields for biofuel production. Nat Biotechnol. 2007;25:759.
Article
CAS
PubMed
Google Scholar
Li X, Weng J-K, Chapple C. Improvement of biomass through lignin modification. Plant J. 2008;54:569–81.
Article
CAS
PubMed
Google Scholar
Wang JP, Matthews ML, Williams CM, Shi R, Yang C, Tunlaya-Anukit S, Chen H-C, Li Q, Liu J, Lin C-Y, et al. Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis. Nat Commun. 2018;9:1579.
Article
PubMed
PubMed Central
CAS
Google Scholar
Zhao Q, Nakashima J, Chen F, Yin Y, Fu C, Yun J, Shao H, Wang X, Wang Z-Y, Dixon RA. Laccase is necessary and nonredundant with peroxidase for lignin polymerization during vascular development in Arabidopsis. Plant Cell. 2013;25:3976–87.
Article
CAS
PubMed
PubMed Central
Google Scholar
Lin C-Y, Li Q, Tunlaya-Anukit S, Shi R, Sun Y-H, Wang JP, Liu J, Loziuk P, Edmunds CW, Miller ZD. A cell wall-bound anionic peroxidase, PtrPO21, is involved in lignin polymerization in Populus trichocarpa. Tree Genet Genomes. 2016;12:22.
Article
Google Scholar
Eudes A, George A, Mukerjee P, Kim JS, Pollet B, Benke PI, Yang F, Mitra P, Sun L, Çetinkol ÖP, et al. Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification. Plant Biotechnol J. 2012;10:609–20.
Article
CAS
PubMed
Google Scholar
Eudes A, Sathitsuksanoh N, Baidoo EEK, George A, Liang Y, Yang F, Singh S, Keasling JD, Simmons BA, Loqué D. Expression of a bacterial 3-dehydroshikimate dehydratase reduces lignin content and improves biomass saccharification efficiency. Plant Biotechnol J. 2015;13:1241–50.
Article
CAS
PubMed
PubMed Central
Google Scholar
Eudes A, Berthomieu R, Hao Z, Zhao N, Benites VT, Baidoo EE, Loqué D. Production of muconic acid in plants. Metab Eng. 2018;46:13–9.
Article
CAS
PubMed
Google Scholar
Li C, Wang JPY, Nishimura Y, Li Q, Chiang VL, Horvath B, Min D, Jameel H, Chang HM, Peszlen I, Horvath L. Down-regulation of glycosyltransferase 8D genes in Populus trichocarpa caused reduced mechanical strength and xylan content in wood. Tree Physiol. 2011;31:226–36.
Article
CAS
PubMed
Google Scholar
Chiniquy D, Sharma V, Schultink A, Baidoo EE, Rautengarten C, Cheng K, Carroll A, Ulvskov P, Harholt J, Keasling JD, et al. XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan. Proc Natl Acad Sci. 2012;109:17117–22.
Article
CAS
PubMed
PubMed Central
Google Scholar
Vega-Sánchez ME, Loqué D, Lao J, Catena M, Verhertbruggen Y, Herter T, Yang F, Harholt J, Ebert B, Baidoo EEK, et al. Engineering temporal accumulation of a low recalcitrance polysaccharide leads to increased C6 sugar content in plant cell walls. Plant Biotechnol J. 2015;13:903–14.
Article
PubMed
CAS
Google Scholar
Biswal AK, Atmodjo MA, Li M, Baxter HL, Yoo CG, Pu Y, Lee Y-C, Mazarei M, Black IM, Zhang J-Y, et al. Sugar release and growth of biofuel crops are improved by downregulation of pectin biosynthesis. Nat Biotechnol. 2018;36:249.
Article
CAS
PubMed
Google Scholar
Saathoff AJ, Sarath G, Chow EK, Dien BS, Tobias CM. Downregulation of cinnamyl-alcohol dehydrogenase in switchgrass by RNA silencing results in enhanced glucose release after cellulase treatment. PLoS ONE. 2011;6:e16416.
Article
CAS
PubMed
PubMed Central
Google Scholar
Xu B, Escamilla-Treviño LL, Sathitsuksanoh N, Shen Z, Shen H, Percival Zhang Y-H, Dixon RA, Zhao B. Silencing of 4-coumarate:coenzyme A ligase in switchgrass leads to reduced lignin content and improved fermentable sugar yields for biofuel production. New Phytol. 2011;192:611–25.
Article
CAS
PubMed
Google Scholar
Fu C, Mielenz JR, Xiao X, Ge Y, Hamilton CY, Rodriguez M, Chen F, Foston M, Ragauskas A, Bouton J, et al. Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass. Proc Natl Acad Sci. 2011;108:3803–8.
Article
CAS
PubMed
PubMed Central
Google Scholar
Shen H, He X, Poovaiah CR, Wuddineh WA, Ma J, Mann DGJ, Wang H, Jackson L, Tang Y, Neal Stewart Jr C, et al. Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks. New Phytol. 2012;193:121–36.
Article
CAS
PubMed
Google Scholar
Shen H, Poovaiah CR, Ziebell A, Tschaplinski TJ, Pattathil S, Gjersing E, Engle NL, Katahira R, Pu Y, Sykes R, et al. Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production. Biotechnol Biofuels. 2013;6:71.
Article
CAS
PubMed
PubMed Central
Google Scholar
Gallego-Giraldo L, Shadle G, Shen H, Barros-Rios J, Fresquet Corrales S, Wang H, Dixon RA. Combining enhanced biomass density with reduced lignin level for improved forage quality. Plant Biotechnol J. 2016;14:895–904.
Article
CAS
PubMed
Google Scholar
Wuddineh WA, Mazarei M, Turner GB, Sykes RW, Decker SR, Davis MF, Stewart CN Jr. Identification and molecular characterization of the switchgrass AP2/ERF transcription factor superfamily, and overexpression of PvERF001 for improvement of biomass characteristics for biofuel. Front Bioeng Biotechnol. 2015;3:101–101.
Article
PubMed
PubMed Central
Google Scholar
Wuddineh WA, Mazarei M, Zhang J-Y, Turner GB, Sykes RW, Decker SR, Davis MF, Udvardi MK, Stewart CN Jr. Identification and overexpression of a Knotted1-like transcription factor in switchgrass (Panicum virgatum L.) for lignocellulosic feedstock improvement. Front Plant Sci. 2016;7:520–520.
Article
PubMed
PubMed Central
Google Scholar
Wu Z, Cao Y, Yang R, Qi T, Hang Y, Lin H, Zhou G, Wang Z-Y, Fu C. Switchgrass SBP-box transcription factors PvSPL1 and 2 function redundantly to initiate side tillers and affect biomass yield of energy crop. Biotechnol Biofuels. 2016;9:101.
Article
PubMed
PubMed Central
CAS
Google Scholar
Yan J, Liu Y, Wang K, Li D, Hu Q, Zhang W. Overexpression of OsPIL1 enhanced biomass yield and saccharification efficiency in switchgrass. Plant Sci. 2018;276:143–51.
Article
CAS
PubMed
Google Scholar
Li G, Jones KC, Eudes A, Pidatala VR, Sun J, Xu F, Zhang C, Wei T, Jain R, Birdseye D, et al. Overexpression of a rice BAHD acyltransferase gene in switchgrass (Panicum virgatum L.) enhances saccharification. BMC Biotechnol. 2018;18:54.
Article
PubMed
PubMed Central
CAS
Google Scholar
Chuck GS, Tobias C, Sun L, Kraemer F, Li C, Dibble D, Arora R, Bragg JN, Vogel JP, Singh S, et al. Overexpression of the maize Corngrass1 microRNA prevents flowering, improves digestibility, and increases starch content of switchgrass. Proc Natl Acad Sci. 2011;108:17550–5.
Article
CAS
PubMed
PubMed Central
Google Scholar
Fu C, Sunkar R, Zhou C, Shen H, Zhang J-Y, Matts J, Wolf J, Mann DGJ, Stewart CN Jr, Tang Y, Wang Z-Y. Overexpression of miR156 in switchgrass (Panicum virgatum L.) results in various morphological alterations and leads to improved biomass production. Plant Biotechnol J. 2012;10:443–52.
Article
CAS
PubMed
PubMed Central
Google Scholar
Gilna P, Lynd LR, Mohnen D, Davis MF, Davison BH. Progress in understanding and overcoming biomass recalcitrance: a BioEnergy Science Center (BESC) perspective. Biotechnol Biofuels. 2017;10:285–285.
Article
PubMed
PubMed Central
Google Scholar
Nguyen QA, Tucker MP: Dilute acid/metal salt hydrolysis of lignocellulosics. Google Patents; 2002.
Wei H, Donohoe BS, Vinzant TB, Ciesielski PN, Wang W, Gedvilas LM, Zeng Y, Johnson DK, Ding SY, Himmel ME, Tucker MP. Elucidating the role of ferrous ion cocatalyst in enhancing dilute acid pretreatment of lignocellulosic biomass. Biotechnol Biofuels. 2011;4:48.
Article
PubMed
PubMed Central
CAS
Google Scholar
Wei H, Yang H, Ciesielski PN, Donohoe BS, McCann MC, Murphy AS, Peer WA, Ding S-Y, Himmel ME, Tucker MP. Transgenic ferritin overproduction enhances thermochemical pretreatments in Arabidopsis. Biomass Bioenerg. 2015;72:55–64.
Article
CAS
Google Scholar
Yang H, Wei H, Ma G, Antunes MS, Vogt S, Cox J, Zhang X, Liu X, Bu L, Gleber SC, et al. Cell wall targeted in planta iron accumulation enhances biomass conversion and seed iron concentration in Arabidopsis and rice. Plant Biotechnol J. 2016;14:1998–2009.
Article
CAS
PubMed
PubMed Central
Google Scholar
Lin CY, Jakes JE, Donohoe BS, Ciesielski PN, Yang H, Gleber SC, Vogt S, Ding SY, Peer WA, Murphy AS, et al. Directed plant cell-wall accumulation of iron: embedding co-catalyst for efficient biomass conversion. Biotechnol Biofuels. 2016;9:225.
Article
PubMed
PubMed Central
CAS
Google Scholar
Beasley JT, Bonneau JP, Sánchez-Palacios JT, Moreno-Moyano LT, Callahan DL, Tako E, Glahn RP, Lombi E, Johnson AAT. Metabolic engineering of bread wheat improves grain iron concentration and bioavailability. Plant Biotechnol J. 2019;17:1514–26.
Article
CAS
PubMed
PubMed Central
Google Scholar
Fang R-X, Pang Z, Gao D-M, Mang K-Q, Chua N-H. cDNA sequence of a virus-inducible, glycine-rich protein gene from rice. Plant Mol Biol. 1991;17:1255–7.
Article
CAS
PubMed
Google Scholar
Chen X, Equi R, Baxter H, Berk K, Han J, Agarwal S, Zale J. A high-throughput transient gene expression system for switchgrass (Panicum virgatum L.) seedlings. Biotechnol Biofuels. 2010;3:9–9.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kumar V, Campbell LM, Rathore KS. Rapid recovery- and characterization of transformants following Agrobacterium-mediated T-DNA transfer to sorghum. Plant Cell Tissue Organ Cult (PCTOC). 2011;104:137–46.
Article
CAS
Google Scholar
Wei H, Chen X, Shekiro J, Kuhn E, Wang W, Ji Y, Kozliak E, Himmel M, Tucker M. Kinetic modelling and experimental studies for the effects of Fe2+ Ions on xylan hydrolysis with dilute-acid pretreatment and subsequent enzymatic hydrolysis. Catalysts. 2018;8:39.
Article
CAS
Google Scholar
De Loose M, Gheysen G, Tire C, Gielen J, Villarroel R, Genetello C, Van Montagu M, Depicker A, Inzé D. The extensin signal peptide allows secretion of a heterologous protein from protoplasts. Gene. 1991;99:95–100.
Article
PubMed
Google Scholar
Viegas A, Sardinha J, Freire F, Duarte Daniel F, Carvalho Ana L, Fontes Carlos MGA, Romão Maria J, Macedo Anjos L, Cabrita Eurico J. Solution structure, dynamics and binding studies of a family 11 carbohydrate-binding module from Clostridium thermocellum (CtCBM11). Biochem J. 2013;451:289–300.
Article
CAS
PubMed
Google Scholar
Lee S-H, Song KB. Purification of an iron-binding nona-peptide from hydrolysates of porcine blood plasma protein. Process Biochem. 2009;44:378–81.
Article
CAS
Google Scholar
Gelvin SB. Agrobacterium-mediated plant transformation: the biology behind the “gene-jockeying” tool. Microbiol Mol Biol Rev MMBR. 2003;67:16–37.
Article
CAS
PubMed
Google Scholar
Bubner B, Gase K, Baldwin IT. Two-fold differences are the detection limit for determining transgene copy numbers in plants by real-time PCR. BMC Biotechnol. 2004;4:14–14.
Article
PubMed
PubMed Central
CAS
Google Scholar
Ting-Bo J, Bao-Jian D, Feng-Juan LI, Chuan-Ping Y. Differential expression of endogenous ferritin genes and iron homeostasis alteration in transgenic tobacco overexpressing soybean ferritin gene. Acta Genetica Sinica. 2006;33:1120–6.
Article
Google Scholar
Arosio P, Ingrassia R, Cavadini P. Ferritins: a family of molecules for iron storage, antioxidation and more. Biochimica et Biophysica Acta BBA General Subjects. 2009;1790:589–99.
Article
CAS
PubMed
Google Scholar
Briat J-F, Dubos C, Gaymard F. Iron nutrition, biomass production, and plant product quality. Trends Plant Sci. 2015;20:33–40.
Article
CAS
PubMed
Google Scholar
Guo A, Hu Y, Shi M, Wang H, Wu Y, Wang Y. Effects of iron deficiency and exogenous sucrose on the intermediates of chlorophyll biosynthesis in Malus halliana. PLoS ONE. 2020;15:e0232694.
Article
CAS
PubMed
PubMed Central
Google Scholar
Goto F, Yoshihara T, Saiki H. Iron accumulation and enhanced growth in transgenic lettuce plants expressing the iron- binding protein ferritin. Theor Appl Genet. 2000;100:658–64.
Article
CAS
Google Scholar
Hegedűs A, Janda T, Horváth GV, Dudits D. Accumulation of overproduced ferritin in the chloroplast provides protection against photoinhibition induced by low temperature in tobacco plants. J Plant Physiol. 2008;165:1647–51.
Article
PubMed
CAS
Google Scholar
Parveen S, Gupta DB, Dass S, Kumar A, Pandey A, Chakraborty S, Chakraborty N. Chickpea ferritin CaFer1 participates in oxidative stress response and promotes growth and development. Sci Rep. 2016;6:31218.
Article
CAS
PubMed
PubMed Central
Google Scholar
Frederick N, Li M, Carrier DJ, Buser MD, Wilkins MR. Switchgrass storage effects on the recovery of carbohydrates after liquid hot water pretreatment and enzymatic hydrolysis. AIMS Bioeng. 2016;3:389–99.
Article
Google Scholar
Yan L, Ma R, Li L, Fu J. Hot water pretreatment of lignocellulosic biomass: An effective and environmentally friendly approach to enhance biofuel production. Chem Eng Technol. 2016;39:1759–70.
Article
CAS
Google Scholar
Martín-Lara MA, Chica-Redecillas L, Pérez A, Blázquez G, Garcia-Garcia G, Calero M. Liquid hot water pretreatment and enzymatic hydrolysis as a valorization route of Italian green pepper waste to delivery free sugars. Foods. 2020;9:1640.
Article
PubMed Central
CAS
Google Scholar
Shen B, Sun X, Zuo X, Shilling T, Apgar J, Ross M, Bougri O, Samoylov V, Parker M, Hancock E, et al. Engineering a thermoregulated intein-modified xylanase into maize for consolidated lignocellulosic biomass processing. Nat Biotechnol. 2012;30:1131–6.
Article
CAS
PubMed
Google Scholar
Mitros T, Session AM, James BT, Wu GA, Belaffif MB, Clark LV, Shu S, Dong H, Barling A, Holmes JR, et al. Genome biology of the paleotetraploid perennial biomass crop Miscanthus. Nat Commun. 2020;11:5442.
Article
CAS
PubMed
PubMed Central
Google Scholar
Vogel J. Unique aspects of the grass cell wall. Curr Opin Plant Biol. 2008;11:301–7.
Article
CAS
PubMed
Google Scholar
Hardin CF, Fu C, Hisano H, Xiao X, Shen H, Stewart CN, Parrott W, Dixon RA, Wang Z-Y. Standardization of switchgrass sample collection for cell wall and biomass trait analysis. BioEnergy Res. 2013;6:755–62.
Article
Google Scholar
Chung D, Sarai NS, Knott BC, Hengge N, Russell JF, Yarbrough JM, Brunecky R, Young J, Supekar N, Vander Wall T, et al. Glycosylation is vital for industrial performance of hyperactive cellulases. ACS Sustain Chem Eng. 2019;7:4792–800.
Article
CAS
Google Scholar
Saywell LG, Cunningham BB. Determination of Iron: colorimetric o-phenanthroline method. Ind Eng Chem Anal Ed. 1937;9:67–9.
Article
CAS
Google Scholar
Weigel D, Glazebrook J. Transformation of Agrobacterium using the freeze-thaw method. CSH Protoc. 2006. https://doi.org/10.1101/pdb.prot4666.
Article
PubMed
Google Scholar
Zhao S, Wei H, Lin C-Y, Zeng Y, Tucker MP, Himmel ME, Ding S-Y. Burkholderia phytofirmans inoculation-induced changes on the shoot cell anatomy and iron accumulation reveal novel components of arabidopsis-endophyte interaction that can benefit downstream biomass deconstruction. Front Plant Sci. 2016;7:24.
PubMed
PubMed Central
Google Scholar
Somleva MN, Snell KD, Beaulieu JJ, Peoples OP, Garrison BR, Patterson NA. Production of polyhydroxybutyrate in switchgrass, a value-added co-product in an important lignocellulosic biomass crop. Plant Biotechnol J. 2008;6:663–78.
Article
CAS
PubMed
Google Scholar
Bradford MM. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 1976;72:248–54.
Article
CAS
PubMed
Google Scholar
Wei H, Layzell DB. Adenylate-coupled ion movement. A mechanism for the control of nodule permeability to O2 diffusion. Plant Physiol. 2006;141:280–7.
Article
CAS
PubMed
PubMed Central
Google Scholar
Vansuyt G, Robin A, Briat J-F, Curie C, Lemanceau P. Iron acquisition from Fe-pyoverdine by Arabidopsis thaliana. Mol Plant Microbe Interact. 2007;20:441–7.
Article
CAS
PubMed
Google Scholar
Stacey MG, Patel A, McClain WE, Mathieu M, Remley M, Rogers EE, Gassmann W, Blevins DG, Stacey G. The Arabidopsis AtOPT3 protein functions in metal homeostasis and movement of iron to developing seeds. Plant Physiol. 2008;146:589–601.
Article
CAS
PubMed
PubMed Central
Google Scholar
Selig MJ, Tucker MP, Sykes RW, Reichel KL, Brunecky R, Himmel ME, Davis MF, Decker SR. Lignocellulose recalcitrance screening by integrated high-throughput hydrothermal pretreatment and enzymatic saccharification. Ind Biotechnol. 2010;6:104–11.
Article
CAS
Google Scholar