Pauly M, Keegstra K. Cell-wall carbohydrates and their modification as a resource for biofuels. Plant J. 2008;54:559–68.
Article
CAS
Google Scholar
Kim SR, Park Y-C, Jin Y-S, Seo J-H. Strain engineering of Saccharomyces cerevisiae for enhanced xylose metabolism. Biotechnol Adv. 2013;31:851–61.
Article
CAS
Google Scholar
Kondo A, Ishii J, Hara KY, Hasunuma T, Matsuda F. Development of microbial cell factories for bio-refinery through synthetic bioengineering. J Biotechnol. 2013;163:204–16.
Article
CAS
Google Scholar
Hong K-K, Nielsen J. Metabolic engineering of Saccharomyces cerevisiae: a key cell factory platform for future biorefineries. Cell Mol Life Sci. 2012;69:2671–90.
Article
CAS
Google Scholar
Matsuda F, Ishii J, Kondo T, Ida K, Tezuka H, Kondo A. Increased isobutanol production in Saccharomyces cerevisiae by eliminating competing pathways and resolving cofactor imbalance. Microb Cell Fact. 2013;12:1–11.
Article
Google Scholar
Krivoruchko A, Serrano-Amatriain C, Chen Y, Siewers V, Nielsen J. Improving biobutanol production in engineered Saccharomyces cerevisiae by manipulation of acetyl-CoA metabolism. J Ind Microbiol Biotechnol. 2013;40:1051–6.
Article
CAS
Google Scholar
Lee W-H, Seo S-O, Bae Y-H, Nan H, Jin Y-S, Seo J-H. Isobutanol production in engineered Saccharomyces cerevisiae by overexpression of 2-ketoisovalerate decarboxylase and valine biosynthetic enzymes. Bioprocess Biosyst Eng. 2012;35:1467–75.
Article
CAS
Google Scholar
Ghiaci P, Norbeck J, Larsson C. 2-Butanol and butanone production in Saccharomyces cerevisiae through combination of a b12 dependent dehydratase and a secondary alcohol dehydrogenase using a TEV-based expression system. PLoS ONE. 2014;9:e102774.
Article
Google Scholar
de Jong BW, Shi S, Valle-Rodríguez JO, Siewers V, Nielsen J. Metabolic pathway engineering for fatty acid ethyl ester production in Saccharomyces cerevisiae using stable chromosomal integration. J Ind Microbiol Biotechnol. 2015;42:477–86.
Article
Google Scholar
Lian J, Zhao H. Reversal of the β-oxidation cycle in Saccharomyces cerevisiae for production of fuels and chemicals. ACS Synth Biol. 2015;4:332–41.
Article
CAS
Google Scholar
Chen L, Zhang J, Lee J, Chen WN. Enhancement of free fatty acid production in Saccharomyces cerevisiae by control of fatty acyl-CoA metabolism. Appl Microbiol Biotechnol. 2014;98:6739–50.
Article
CAS
Google Scholar
Runguphan W, Keasling JD. Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid-derived biofuels and chemicals. Metab Eng. 2014;21:103–13.
Article
CAS
Google Scholar
Durrett TP, McClosky DD, Tumaney AW, Elzinga DA, Ohlrogge J, Pollard M. A distinct DGAT with sn-3 acetyltransferase activity that synthesizes unusual, reduced-viscosity oils in Euonymus and transgenic seeds. Proc Natl Acad Sci USA. 2010;107:9464–9.
Article
CAS
Google Scholar
Liu J, Rice A, McGlew K, Shaw V, Park H, Clemente T, Pollard M, Ohlrogge J, Durrett TP. Metabolic engineering of oilseed crops top produce high levels of novel acetyl glyceride oils with reduced viscosity, freezing point and calorific value. Plant Biotechnol J. 2015;13:858–65.
Article
CAS
Google Scholar
Ryan TW, Dodge LG, Callahan TJ. The effects of vegetable oil properties on injection and combustion in 2 different diesel-engines. J Am Oil Chem Soc. 1984;61:1610–9.
Article
CAS
Google Scholar
Durrett TP, Benning C, Ohlrogge J. Plant triacylglycerols as feedstocks for the production of biofuels. Plant J. 2008;54:593–607.
Article
CAS
Google Scholar
Gaupp R, Adams W. Acid esters of mono- and diglycerides. In: Whitehurst RJ, editor. Emulsifiers in food technology. Oxford: Blackwell Publishing; 2004. p. 59–68.
Chapter
Google Scholar
Coltro L, Pitta JB, Madaleno E. Performance evaluation of new plasticizers for stretch PVC films. Polym Test. 2013;32:272–8.
Article
CAS
Google Scholar
Bagby MO, Smith CR Jr. Asymmetric triglycerides from Impatiens edgeworthii seed oil. Biochim Biophys Acta. 1967;137:475–7.
Article
CAS
Google Scholar
Kleiman R, Miller RW, Earle FR, Wolff IA. (S)-1,2-diacyl-3-acetins: optically active triglycerides from Euonymus verrucosus seed oil. Lipids. 1967;2:473–8.
Article
CAS
Google Scholar
Liu J, Tjellström H, McGlew K, Shaw V, Rice A, Simpson J, Kosma D, Ma W, Yang W, Strawsine M, et al. Field production, purification and analysis of high-oleic acetyl-triacylglycerols from transgenic Camelina sativa. Ind Crop Prod. 2015;65:259–68.
Article
CAS
Google Scholar
Sandager L, Gustavsson MH, Stahl U, Dahlqvist A, Wiberg E, Banas A, Lenman M, Ronne H, Stymne S. Storage lipid synthesis is non-essential in yeast. J Biol Chem. 2002;277:6478–82.
Article
CAS
Google Scholar
Keating DH, Zhang Y, Ong IM, McIlwain S, Morales EH, Grass JA, Tremaine M, Bothfeld W, Higbee A, Ulbrich A, et al. Aromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification. Front Microbiol. 2014;5:402.
Article
Google Scholar
Sarks C, Higbee A, Piotrowski J, Xue S, Coon JJ, Sato TK, Jin M, Balan V, Dale BE. Quantifying pretreatment degradation compounds in solution and accumulated by cells during solids and yeast recycling in the Rapid Bioconversion with Integrated recycling Technology process using AFEX™ corn stover. Bioresour Technol. 2016;205:24–33.
Article
CAS
Google Scholar
Tang X, da Costa Sousa L, Jin M, Chundawat SP, Chambliss CK, Lau MW, Xiao Z, Dale BE, Balan V. Designer synthetic media for studying microbial-catalyzed biofuel production. Biotechnol Biofuels. 2015;8:1–17.
Article
Google Scholar
Wohlbach DJ, Kuo A, Sato TK, Potts KM, Salamov AA, LaButti KM, Sun H, Clum A, Pangilinan JL, Lindquist EA, et al. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Proc Natl Acad Sci USA. 2011;108:13212–7.
Article
CAS
Google Scholar
Jin M, Sarks C, Gunawan C, Bice BD, Simonett SP, Avanasi Narasimhan R, Willis LB, Dale BE, Balan V, Sato TK. Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover. Biotechnol Biofuels. 2013;6:1–14.
Article
Google Scholar
Wohlbach DJ, Rovinskiy N, Lewis JA, Sardi M, Schackwitz WS, Martin JA, Deshpande S, Daum CG, Lipzen A, Sato TK, et al. Comparative genomics of Saccharomyces cerevisiae natural isolates for bioenergy production. Genome Biol Evol. 2014;6:2557–66.
Article
CAS
Google Scholar
Pisithkul T, Jacobson TB, O’Brien TJ, Stevenson DM, Amador-Noguez D. Phenolic amides are potent inhibitors of de novo nucleotide biosynthesis. Appl Environ Microbiol. 2015;81:5761–72.
Article
CAS
Google Scholar
Parreiras LS, Breuer RJ, Avanasi Narasimhan R, Higbee AJ, La Reau A, Tremaine M, Qin L, Willis LB, Bice BD, Bonfert BL, et al. Engineering and two-stage evolution of a lignocellulosic hydrolysate-tolerant Saccharomyces cerevisiae strain for anaerobic fermentation of xylose from AFEX pretreated corn stover. PLoS ONE. 2014;9:e107499.
Article
Google Scholar
Bates PD, Johnson SR, Cao X, Li J, Nam J-W, Jaworski JG, Ohlrogge JB, Browse J. Fatty acid synthesis is inhibited by inefficient utilization of unusual fatty acids for glycerolipid assembly. Proc Natl Acad Sci USA. 2014;111:1204–9.
Article
CAS
Google Scholar
Oelkers P, Cromley D, Padamsee M, Billheimer JT, Sturley SL. The DGA1 Gene determines a second triglyceride synthetic pathway in yeast. J Biol Chem. 2002;277:8877–81.
Article
CAS
Google Scholar
Bansal S, Durrett TP. Rapid Quantification of low-viscosity acetyl-triacylglycerols using electrospray ionization mass spectrometry. Lipids. 2016;51:1093–102.
Article
CAS
Google Scholar
Rajakumari S, Grillitsch K, Daum G. Synthesis and turnover of non-polar lipids in yeast. Prog Lipid Res. 2008;47:157–71.
Article
CAS
Google Scholar
Zhang H, Damude HG, Yadav NS. Three diacylglycerol acyltransferases contribute to oil biosynthesis and normal growth in Yarrowia lipolytica. Yeast. 2012;29:25–38.
Article
Google Scholar
Rani SH, Saha S, Rajasekharan R. A soluble diacylglycerol acyltransferase is involved in triacylglycerol biosynthesis in the oleaginous yeast Rhodotorula glutinis. Microbiology. 2013;159:155–66.
Article
CAS
Google Scholar
Güldener U, Heck S, Fiedler T, Beinhauer J, Hegemann JH. A new efficient gene disruption cassette for repeated use in budding yeast. Nucleic Acids Res. 1996;24:2519–24.
Article
Google Scholar
Gietz RD, Schiestl RH. High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method. Nat Protocols. 2007;2:31–4.
Article
CAS
Google Scholar
Sikorski RS, Hieter P. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics. 1989;122:19–27.
CAS
Google Scholar
Voth WP, Richards JD, Shaw JM, Stillman DJ. Yeast vectors for integration at the HO locus. Nucleic Acids Res. 2001;29:e59.
Article
CAS
Google Scholar
Lee WNP, Byerley LO, Bergner EA, Edmond J. Mass isotopomer analysis: theoretical and practical considerations. Biol Mass Spectrom. 1991;20:451–8.
Article
CAS
Google Scholar
Bates PD, Durrett TP, Ohlrogge JB, Pollard M. Analysis of acyl fluxes through multiple pathways of triacylglycerol synthesis in developing soybean embryos. Plant Physiol. 2009;150:55–72.
Article
CAS
Google Scholar