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  1. We describe a new selection method based on BODIPY (4,4-difluoro-1,3,5,7-tetramethyl-4-bora-3a,4a-diaza-s-indacene) staining, fluorescence activated cell sorting (FACS) and microplate-based isolation of lipid-ric...

    Authors: Hugo Pereira, Luísa Barreira, André Mozes, Cláudia Florindo, Cristina Polo, Catarina V Duarte, Luísa Custódio and João Varela
    Citation: Biotechnology for Biofuels 2011 4:61
  2. Due to the complexity of lignocellulosic materials, a complete enzymatic hydrolysis into fermentable sugars requires a variety of cellulolytic and xylanolytic enzymes. Addition of xylanases has been shown to s...

    Authors: Junhua Zhang, Matti Siika-aho, Maija Tenkanen and Liisa Viikari
    Citation: Biotechnology for Biofuels 2011 4:60
  3. Contamination of bacteria in large-scale yeast fermentations is a serious problem and a threat to the development of successful biofuel production plants. Huge research efforts have been spent in order to solv...

    Authors: Eva Albers, Emma Johansson, Carl Johan Franzén and Christer Larsson
    Citation: Biotechnology for Biofuels 2011 4:59
  4. Large-scale production of effective cellulose hydrolytic enzymes is the key to the bioconversion of agricultural residues to ethanol. The goal of this study was to develop a rice plant as a bioreactor for the ...

    Authors: Hong Li Chou, Ziyu Dai, Chia Wen Hsieh and Maurice SB Ku
    Citation: Biotechnology for Biofuels 2011 4:58
  5. The optimization of industrial bioethanol production will depend on the rational design and manipulation of industrial strains to improve their robustness against the many stress factors affecting their perfor...

    Authors: Francisco B Pereira, Pedro MR Guimarães, Daniel G Gomes, Nuno P Mira, Miguel C Teixeira, Isabel Sá-Correia and Lucília Domingues
    Citation: Biotechnology for Biofuels 2011 4:57
  6. Solid acid catalyst was prepared from Kraft lignin by chemical activation with phosphoric acid, pyrolysis and sulfuric acid. This catalyst had high acid density as characterized by scanning electron microscope...

    Authors: Fei-ling Pua, Zhen Fang, Sarani Zakaria, Feng Guo and Chin-hua Chia
    Citation: Biotechnology for Biofuels 2011 4:56

    The Erratum to this article has been published in Biotechnology for Biofuels 2012 5:66

  7. The recalcitrance of lignocellulosic materials is a major limitation for their conversion into fermentable sugars. Lignin depletion in new cultivars or transgenic plants has been identified as a way to diminis...

    Authors: Fernando Masarin, Daniela B Gurpilhares, David CF Baffa, Márcio HP Barbosa, Walter Carvalho, André Ferraz and Adriane MF Milagres
    Citation: Biotechnology for Biofuels 2011 4:55
  8. In recent years, biorefining of lignocellulosic biomass to produce multi-products such as ethanol and other biomaterials has become a dynamic research area. Pretreatment technologies that fractionate sugarcane...

    Authors: Camila Alves Rezende, Marisa Aparecida de Lima, Priscila Maziero, Eduardo Ribeiro deAzevedo, Wanius Garcia and Igor Polikarpov
    Citation: Biotechnology for Biofuels 2011 4:54
  9. Mixtures of prairie species (mixed prairie species; MPS) have been proposed to offer important advantages as a feedstock for sustainable production of fuels and chemicals. Therefore, understanding the performa...

    Authors: Jaclyn D DeMartini and Charles E Wyman
    Citation: Biotechnology for Biofuels 2011 4:52
  10. The description of new hydrolytic enzymes is an important step in the development of techniques which use lignocellulosic materials as a starting point for fuel production. Sugarcane bagasse, which is subjecte...

    Authors: Severino A Lucena, Leile S Lima, LuĂ­s SA Cordeiro Jr, Celso Sant'Anna, Reginaldo Constantino, Patricia Azambuja, Wanderley de Souza, Eloi S Garcia and Fernando A Genta
    Citation: Biotechnology for Biofuels 2011 4:51
  11. Lignocellulosic materials have been moved towards the forefront of the biofuel industry as a sustainable resource. However, saccharification and the production of bioproducts derived from plant cell wall bioma...

    Authors: João Paulo L Franco Cairo, Flávia C Leonardo, Thabata M Alvarez, Daniela A Ribeiro, Fernanda Büchli, Ana M Costa-Leonardo, Marcelo F Carazzolle, Fernando F Costa, Adriana F Paes Leme, Gonçalo AG Pereira and Fabio M Squina
    Citation: Biotechnology for Biofuels 2011 4:50
  12. Softwoods are the dominant source of lignocellulosic biomass in the northern hemisphere, and have been investigated worldwide as a renewable substrate for cellulosic ethanol production. One challenge to using ...

    Authors: Gary M Hawkins and Joy Doran-Peterson
    Citation: Biotechnology for Biofuels 2011 4:49
  13. Recently developed iron cocatalyst enhancement of dilute acid pretreatment of biomass is a promising approach for enhancing sugar release from recalcitrant lignocellulosic biomass. However, very little is know...

    Authors: Hui Wei, Bryon S Donohoe, Todd B Vinzant, Peter N Ciesielski, Wei Wang, Lynn M Gedvilas, Yining Zeng, David K Johnson, Shi-You Ding, Michael E Himmel and Melvin P Tucker
    Citation: Biotechnology for Biofuels 2011 4:48
  14. Biodiesel is considered to be a promising future substitute for fossil fuels, and microalgae are one source of biodiesel. The ratios of lipid, carbohydrates and proteins are different in different microalgal s...

    Authors: Cheng Yuan, Junhan Liu, Yong Fan, Xiaohui Ren, Guangrong Hu and Fuli Li
    Citation: Biotechnology for Biofuels 2011 4:47
  15. In the normal process of bioethanol production, biomass is transported to integrated large factories for degradation to sugar, fermentation, and recovery of ethanol by distillation. Biomass nutrient loss occur...

    Authors: Hiroko K Kitamoto, Mitsuo Horita, Yimin Cai, Yukiko Shinozaki and Keiji Sakaki
    Citation: Biotechnology for Biofuels 2011 4:46
  16. Lignin is a highly abundant biopolymer synthesized by plants as a complex component of plant secondary cell walls. Efforts to utilize lignin-based bioproducts are needed.

    Authors: Venugopal Mendu, Anne E Harman-Ware, Mark Crocker, Jungho Jae, Jozsef Stork, Samuel Morton III, Andrew Placido, George Huber and Seth DeBolt
    Citation: Biotechnology for Biofuels 2011 4:43
  17. The enzymatic production of biodiesel through alcoholysis of triglycerides has become more attractive because it shows potential in overcoming the drawbacks of chemical processes. In this study, we investigate...

    Authors: Koei Kawakami, Yasuhiro Oda and Ryo Takahashi
    Citation: Biotechnology for Biofuels 2011 4:42
  18. In converting biomass to bioethanol, pretreatment is a key step intended to render cellulose more amenable and accessible to cellulase enzymes and thus increase glucose yields. In this study, four cellulose sa...

    Authors: Ashutosh Mittal, Rui Katahira, Michael E Himmel and David K Johnson
    Citation: Biotechnology for Biofuels 2011 4:41
  19. Considering that the costs of cellulases and hemicellulases contribute substantially to the price of bioethanol, new studies aimed at understanding and improving cellulase efficiency and productivity are of pa...

    Authors: Wagner R de Souza, Paula F de Gouvea, Marcela Savoldi, Iran Malavazi, Luciano A de Souza Bernardes, Maria Helena S Goldman, Ronald P de Vries, Juliana V de Castro Oliveira and Gustavo H Goldman
    Citation: Biotechnology for Biofuels 2011 4:40
  20. Hydrolysates of plant biomass used for the production of lignocellulosic biofuels typically contain sugar mixtures consisting mainly of D-glucose and D-xylose, and minor amounts of L-arabinose. The yeast Saccharo...

    Authors: Thorsten Subtil and Eckhard Boles
    Citation: Biotechnology for Biofuels 2011 4:38
  21. Irpex lacteus, a versatile lignin-degrading fungus with various extracellular enzymes, has been widely used for biological pretreatment. However, most studies have focused on the change of substrate structure aft...

    Authors: Wanqing Du, Hongbo Yu, Lili Song, Ji Zhang, Changlong Weng, Fuying Ma and Xiaoyu Zhang
    Citation: Biotechnology for Biofuels 2011 4:37
  22. We and other workers have shown that accessory enzymes, such as β-glucosidase, xylanase, and cellulase cofactors, such as GH61, can considerably enhance the hydrolysis effectiveness of cellulase cocktails when...

    Authors: Jinguang Hu, Valdeir Arantes and Jack N Saddler
    Citation: Biotechnology for Biofuels 2011 4:36
  23. Ethanol production from paper sludge (PS) by simultaneous saccharification and fermentation (SSF) is considered to be the most appropriate way to process PS, as it contains negligible lignin. In this study, SS...

    Authors: Joni Prasetyo, Kazuya Naruse, Tatsuya Kato, Chuenchit Boonchird, Satoshi Harashima and Enoch Y Park
    Citation: Biotechnology for Biofuels 2011 4:35
  24. Microalgae are a promising feedstock for biofuel and bioenergy production due to their high photosynthetic efficiencies, high growth rates and no need for external organic carbon supply. In this study, utiliza...

    Authors: Aino-Maija Lakaniemi, Christopher J Hulatt, David N Thomas, Olli H Tuovinen and Jaakko A Puhakka
    Citation: Biotechnology for Biofuels 2011 4:34
  25. In order to generate biofuels, insoluble cellulosic substrates are pretreated andsubsequently hydrolyzed with cellulases. One way to pretreat cellulose in a safeand environmentally friendly manner is to apply,...

    Authors: Gernot Jäger, Michele Girfoglio, Florian Dollo, Roberto Rinaldi, Hans Bongard, Ulrich Commandeur, Rainer Fischer, Antje C Spiess and Jochen Büchs
    Citation: Biotechnology for Biofuels 2011 4:33
  26. Caldicellulosiruptor saccharolyticus has attracted increased interest as an industrial hydrogen (H2) producer. The aim of the present study was to develop a kinetic growth model for this extreme thermophile. The ...

    Authors: Mattias Ljunggren, Karin Willquist, Guido Zacchi and Ed WJ van Niel
    Citation: Biotechnology for Biofuels 2011 4:31
  27. The main technological impediment to widespread utilization of lignocellulose for the production of fuels and chemicals is the lack of low-cost technologies to overcome its recalcitrance. Organisms that hydrol...

    Authors: Marja IlmĂ©n, Riaan den Haan, Elena Brevnova, John McBride, Erin Wiswall, Allan Froehlich, Anu Koivula, Sanni P Voutilainen, Matti Siika-aho, DaniĂ«l C la Grange, Naomi Thorngren, Simon Ahlgren, Mark Mellon, Kristen Deleault, Vineet Rajgarhia, Willem H van Zyl…
    Citation: Biotechnology for Biofuels 2011 4:30
  28. Cellulases and related hydrolytic enzymes represent a key cost factor for biochemical conversion of cellulosic biomass feedstocks to sugars for biofuels and chemicals production. The US Department of Energy (D...

    Authors: James D McMillan, Edward W Jennings, Ali Mohagheghi and Mildred Zuccarello
    Citation: Biotechnology for Biofuels 2011 4:29
  29. Atmospheric pressure chemical ionisation mass spectrometry (APCI-MS) offers advantages as a rapid analytical technique for the quantification of three biomass degradation products (acetic acid, formic acid and...

    Authors: Scott M Davies, Rob S Linforth, Stuart J Wilkinson, Katherine A Smart and David J Cook
    Citation: Biotechnology for Biofuels 2011 4:28
  30. The trichothecene mycotoxin deoxynivalenol (DON) may be concentrated in distillers dried grains with solubles (DDGS; a co-product of fuel ethanol fermentation) when grain containing DON is used to produce fuel...

    Authors: Piyum A Khatibi, Justin Montanti, Nhuan P Nghiem, Kevin B Hicks, Greg Berger, Wynse S Brooks, Carl A Griffey and David G Schmale III
    Citation: Biotechnology for Biofuels 2011 4:26
  31. Biochemical conversion of lignocellulose hydrolysates remains challenging, largely because most microbial processes have markedly reduced efficiency in the presence of both hexoses and pentoses. Thus, identifi...

    Authors: Cuimin Hu, Siguo Wu, Qian Wang, Guojie Jin, Hongwei Shen and Zongbao K Zhao
    Citation: Biotechnology for Biofuels 2011 4:25
  32. Neocallimastix patriciarum is one of the common anaerobic fungi in the digestive tracts of ruminants that can actively digest cellulosic materials, and its cellulases have great potential for hydrolyzing cellulos...

    Authors: Tzi-Yuan Wang, Hsin-Liang Chen, Mei-Yeh J Lu, Yo-Chia Chen, Huang-Mo Sung, Chi-Tang Mao, Hsing-Yi Cho, Huei-Mien Ke, Teh-Yang Hwa, Sz-Kai Ruan, Kuo-Yen Hung, Chih-Kuan Chen, Jeng-Yi Li, Yueh-Chin Wu, Yu-Hsiang Chen, Shao-Pei Chou…
    Citation: Biotechnology for Biofuels 2011 4:24
  33. To efficiently deconstruct recalcitrant plant biomass to fermentable sugars in industrial processes, biocatalysts of higher performance and lower cost are required. The genetic diversity found in the metagenom...

    Authors: Luen-Luen Li, Safiyh Taghavi, Sean M McCorkle, Yian-Biao Zhang, Michael G Blewitt, Roman Brunecky, William S Adney, Michael E Himmel, Phillip Brumm, Colleen Drinkwater, David A Mead, Susannah G Tringe and Daniel van der Lelie
    Citation: Biotechnology for Biofuels 2011 4:23
  34. As the supply of starch grain and sugar cane, currently the main feedstocks for bioethanol production, become limited, lignocelluloses will be sought as alternative materials for bioethanol production. Product...

    Authors: Yong Tang, Danqing Zhao, Carrasco Cristhian and Jianxin Jiang
    Citation: Biotechnology for Biofuels 2011 4:22
  35. Isobutanol can be a better biofuel than ethanol due to its higher energy density and lower hygroscopicity. Furthermore, the branched-chain structure of isobutanol gives a higher octane number than the isomeric n-...

    Authors: Xiao Chen, Kristian F Nielsen, Irina Borodina, Morten C Kielland-Brandt and Kaisa Karhumaa
    Citation: Biotechnology for Biofuels 2011 4:21
  36. The use of energy crops and agricultural residues is expected to increase to fulfil the legislative demands of bio-based components in transport fuels. Ensiling methods, adapted from the feed sector, are suita...

    Authors: Annukka Pakarinen, Pekka Maijala, Seija Jaakkola, Frederick L Stoddard, Maritta Kymäläinen and Liisa Viikari
    Citation: Biotechnology for Biofuels 2011 4:20
  37. The BioEnergy Science Center (BESC) developed a high-throughput screening method to rapidly identify low-recalcitrance biomass variants. Because the customary separation and analysis of liquid and solids betwe...

    Authors: Michael H Studer, Simone Brethauer, Jaclyn D DeMartini, Heather L McKenzie and Charles E Wyman
    Citation: Biotechnology for Biofuels 2011 4:19
  38. Hemicellulose is often credited with being one of the important physical barriers to enzymatic hydrolysis of cellulose, and acts by blocking enzyme access to the cellulose surface. In addition, our recent rese...

    Authors: Qing Qing and Charles E Wyman
    Citation: Biotechnology for Biofuels 2011 4:18
  39. Termites are highly effective at degrading lignocelluloses, and thus can be used as a model for studying plant cell-wall degradation in biological systems. However, the process of lignin deconstruction and/or ...

    Authors: Jing Ke, Dhrubojyoti D Laskar, Deepak Singh and Shulin Chen
    Citation: Biotechnology for Biofuels 2011 4:17
  40. Pretreatment is a critical step in the conversion of lignocellulose to fermentable sugars. Although many pretreatment processes are currently under investigation, none of them are entirely satisfactory in rega...

    Authors: Goutami Banerjee, Suzana Car, John S Scott-Craig, David B Hodge and Jonathan D Walton
    Citation: Biotechnology for Biofuels 2011 4:16
  41. The recent energy crisis has triggered significant attention on the microbial synthesis of lipids, which comprise the raw material for biodiesel production. Microbial oil accumulation with filamentous fungi ha...

    Authors: Chunjie Xia, Jianguo Zhang, Weidong Zhang and Bo Hu
    Citation: Biotechnology for Biofuels 2011 4:15
  42. Biomass use for the production of bioethanol or platform chemicals requires efficient breakdown of biomass to fermentable monosaccharides. Lignocellulosic feedstocks often require physicochemical pretreatment ...

    Authors: Stefan KĂĽhnel, Henk A Schols and Harry Gruppen
    Citation: Biotechnology for Biofuels 2011 4:14
  43. Short rotation coppice willow is a potential lignocellulosic feedstock in the United Kingdom and elsewhere; however, research on optimising willow specifically for bioethanol production has started developing ...

    Authors: Nicholas JB Brereton, Frederic E Pitre, Michael J Ray, Angela Karp and Richard J Murphy
    Citation: Biotechnology for Biofuels 2011 4:13
  44. In the hydrolysis of lignocellulosic materials, thermostable enzymes decrease the amount of enzyme needed due to higher specific activity and elongate the hydrolysis time due to improved stability. For cost-ef...

    Authors: Junhua Zhang, Matti Siika-aho, Terhi Puranen, Ming Tang, Maija Tenkanen and Liisa Viikari
    Citation: Biotechnology for Biofuels 2011 4:12