Articles
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Citation: Biotechnology for Biofuels 2016 9:131
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Hydrocarbon bio-jet fuel from bioconversion of poplar biomass: techno-economic assessment
Infrastructure compatible hydrocarbon biofuel proposed to qualify as renewable transportation fuel under the U.S. Energy Independence and Security Act of 2007 and Renewable Fuel Standard (RFS2) is evaluated. T...
Citation: Biotechnology for Biofuels 2016 9:141 -
Enhanced lipid production by Rhodosporidium toruloides using different fed-batch feeding strategies with lignocellulosic hydrolysate as the sole carbon source
Industrial biotechnology that is able to provide environmentally friendly bio-based products has attracted more attention in replacing petroleum-based industries. Currently, most of the carbon sources used for...
Citation: Biotechnology for Biofuels 2016 9:130 -
Production of medium-chain carboxylic acids by Megasphaera sp. MH with supplemental electron acceptors
C5–C8 medium-chain carboxylic acids are valuable chemicals as the precursors of various chemicals and transport fuels. However, only a few strict anaerobes have been discovered to produce them and their produc...
Citation: Biotechnology for Biofuels 2016 9:129 -
The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests
Materials rich in lignocellulose, such as straw, are abundant, cheap and highly interesting for biogas production. However, the complex structure of lignocellulose is difficult for microbial cellulolytic enzym...
Citation: Biotechnology for Biofuels 2016 9:128 -
The sorghum SWEET gene family: stem sucrose accumulation as revealed through transcriptome profiling
SWEET is a newly identified family of sugar transporters. Although SWEET transporters have been characterized by using Arabidopsis and rice, very little knowledge of sucrose accumulation in the stem region is ...
Citation: Biotechnology for Biofuels 2016 9:127 -
The impact of alterations in lignin deposition on cellulose organization of the plant cell wall
Coordination of synthesis and assembly of the polymeric components of cell walls is essential for plant growth and development. Given the degree of co-mingling and cross-linking among cell wall components, cel...
Citation: Biotechnology for Biofuels 2016 9:126 -
Strain and bioprocess improvement of a thermophilic anaerobe for the production of ethanol from wood
The thermophilic, anaerobic bacterium Thermoanaerobacterium saccharolyticum digests hemicellulose and utilizes the major sugars present in biomass. It was previously engineered to produce ethanol at yields equiva...
Citation: Biotechnology for Biofuels 2016 9:125 -
Improvement of the thermostability and catalytic efficiency of a highly active β-glucanase from Talaromyces leycettanus JCM12802 by optimizing residual charge–charge interactions
β-Glucanase is one of the most extensively used biocatalysts in biofuel, food and animal feed industries. However, the poor thermostability and low catalytic efficiency of most reported β-glucanases limit thei...
Citation: Biotechnology for Biofuels 2016 9:124 -
Effective cultivation of microalgae for biofuel production: a pilot-scale evaluation of a novel oleaginous microalga Graesiella sp. WBG-1
Commercial production of microalgal biodiesel is not yet economically viable, largely because of low storage lipid yield in microalgae mass cultivation. Selection of lipid-rich microalgae, thus, becomes one of...
Citation: Biotechnology for Biofuels 2016 9:123 -
Chemical analysis and biorefinery of red algae Kappaphycus alvarezii for efficient production of glucose from residue of carrageenan extraction process
Biorefineries serve to efficiently utilize biomass and their by-products. Algal biorefineries are designed to generate bioproducts for commercial use. Due to the high carbohydrate content of algal biomass, bio...
Citation: Biotechnology for Biofuels 2016 9:122 -
Deep metagenome and metatranscriptome analyses of microbial communities affiliated with an industrial biogas fermenter, a cow rumen, and elephant feces reveal major differences in carbohydrate hydrolysis strategies
The diverse microbial communities in agricultural biogas fermenters are assumed to be well adapted for the anaerobic transformation of plant biomass to methane. Compared to natural systems, biogas reactors are...
Citation: Biotechnology for Biofuels 2016 9:121 -
Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system
This study aims to chemically characterize thin stillage derived from lignocellulosic biomass distillation residues in terms of organic strength, nutrient, and mineral content. The feasibility of performing an...
Citation: Biotechnology for Biofuels 2016 9:120 -
A xylose-stimulated xylanase–xylose binding protein chimera created by random nonhomologous recombination
Saccharification of lignocellulosic material by xylanases and other glycoside hydrolases is generally conducted at high concentrations of the final reaction products, which frequently inhibit the enzymes used ...
Citation: Biotechnology for Biofuels 2016 9:119 -
Adsorption and mechanism of cellulase enzymes onto lignin isolated from corn stover pretreated with liquid hot water
In the bioconversion of lignocellulosic substrates, the adsorption behavior of cellulase onto lignin has a negative effect on enzymatic hydrolysis of cellulose, decreasing glucose production during enzymatic h...
Citation: Biotechnology for Biofuels 2016 9:118 -
Engineering Bacillus licheniformis for the production of meso-2,3-butanediol
2,3-Butanediol (2,3-BD) can be used as a liquid fuel additive to replace petroleum oil, and as an important platform chemical in the pharmaceutical and plastic industries. Microbial production of 2,3-BD by Bacill...
Citation: Biotechnology for Biofuels 2016 9:117 -
Simultaneous achievement of high ethanol yield and titer in Clostridium thermocellum
Biofuel production from plant cell walls offers the potential for sustainable and economically attractive alternatives to petroleum-based products. Fuels from cellulosic biomass are particularly promising, but...
Citation: Biotechnology for Biofuels 2016 9:116 -
A novel and simple approach to the good process performance of methane recovery from lignocellulosic biomass alone
Solid-state anaerobic digestion (SS-AD) has been increasingly used for lignocellulosic biomass treatment. However, the separate reactor required for pretreatment prior digestion, poor treatment capacity, and p...
Citation: Biotechnology for Biofuels 2016 9:115 -
DNA microarray of global transcription factor mutant reveals membrane-related proteins involved in n-butanol tolerance in Escherichia coli
Escherichia coli has been explored as a platform host strain for biofuels production such as butanol. However, the severe toxicity of butanol is considered to be one major limitation f...
Citation: Biotechnology for Biofuels 2016 9:114 -
Quantitative proteomic analysis of the influence of lignin on biofuel production by Clostridium acetobutylicum ATCC 824
Clostridium acetobutylicum has been a focus of research because of its ability to produce high-value compounds that can be used as biofuels. Lignocellulose is a promising feedstock, bu...
Citation: Biotechnology for Biofuels 2016 9:113 -
Mycoalgae biofilm: development of a novel platform technology using algae and fungal cultures
Microalgae is considered a promising source for biofuel and bioenergy production, bio-remediation and production of high-value bioactive compounds, but harvesting microalgae is a major bottleneck in the algae ...
Citation: Biotechnology for Biofuels 2016 9:112 -
Cellular adhesiveness and cellulolytic capacity in Anaerolineae revealed by omics-based genome interpretation
The Anaerolineae lineage of Chloroflexi had been identified as one of the core microbial populations in anaerobic digesters; however, the ecological role of the Anaerolineae remains uncertain due to the scarcity ...
Citation: Biotechnology for Biofuels 2016 9:111 -
Exploring glycoside hydrolases and accessory proteins from wood decay fungi to enhance sugarcane bagasse saccharification
Glycoside hydrolases (GHs) and accessory proteins are key components for efficient and cost-effective enzymatic hydrolysis of polysaccharides in modern, biochemically based biorefineries. Currently, commercial...
Citation: Biotechnology for Biofuels 2016 9:110 -
Production of a functional cell wall-anchored minicellulosome by recombinant Clostridium acetobutylicum ATCC 824
The use of fossil fuels is no longer tenable. Not only are they a finite resource, their use is damaging the environment through pollution and global warming. Alternative, environmentally friendly, renewable s...
Citation: Biotechnology for Biofuels 2016 9:109 -
Salt-responsive lytic polysaccharide monooxygenases from the mangrove fungus Pestalotiopsis sp. NCi6
Lytic polysaccharide monooxygenases (LPMOs) belong to the “auxiliary activities (AA)” enzyme class of the CAZy database. They are known to strongly improve the saccharification process and boost soluble sugar ...
Citation: Biotechnology for Biofuels 2016 9:108 -
Exploring fatty alcohol-producing capability of Yarrowia lipolytica
Fatty alcohols are important oleochemicals widely used in detergents, surfactants and personal care products. Bio-synthesized fatty alcohol provides a promising alternative to traditional fatty alcohol industr...
Citation: Biotechnology for Biofuels 2016 9:107 -
Natural genetic variability reduces recalcitrance in poplar
Lignin content and structure are known to affect recalcitrance of lignocellulosic biomass to chemical/biochemical conversion. Previously, we identified rare Populus trichocarpa natural variants with significantly...
Citation: Biotechnology for Biofuels 2016 9:106 -
The two Rasamsonia emersonii α-glucuronidases, ReGH67 and ReGH115, show a different mode-of-action towards glucuronoxylan and glucuronoxylo-oligosaccharides
The production of biofuels and biochemicals from grass-type plant biomass requires a complete utilisation of the plant cellulose and hemicellulosic xylan via enzymatic degradation to their constituent monosacc...
Citation: Biotechnology for Biofuels 2016 9:105 -
Decoding the complete arsenal for cellulose and hemicellulose deconstruction in the highly efficient cellulose decomposer Paenibacillus O199
The search for new enzymes and microbial strains to degrade plant biomass is one of the most important strategies for improving the conversion processes in the production of environment-friendly chemicals and ...
Citation: Biotechnology for Biofuels 2016 9:104 -
A water-forming NADH oxidase regulates metabolism in anaerobic fermentation
Water-forming NADH oxidase can oxidize cytosolic NADH to NAD+, thus relieving cytosolic NADH accumulation in Saccharomyces cerevisiae. Previous studies of the enzyme were conducted under aerobic conditions, as O2
Citation: Biotechnology for Biofuels 2016 9:103 -
Conversion of H2 and CO2 to CH4 and acetate in fed-batch biogas reactors by mixed biogas community: a novel route for the power-to-gas concept
Applications of the power-to-gas principle for the handling of surplus renewable electricity have been proposed. The feasibility of using hydrogenotrophic methanogens as CH4 generating catalysts has been demonstr...
Citation: Biotechnology for Biofuels 2016 9:102 -
Scaling-up of a novel, simplified MFC stack based on a self-stratifying urine column
The microbial fuel cell (MFC) is a technology in which microorganisms employ an electrode (anode) as a solid electron acceptor for anaerobic respiration. This results in direct transformation of chemical energ...
Citation: Biotechnology for Biofuels 2016 9:93 -
Switchgrass SBP-box transcription factors PvSPL1 and 2 function redundantly to initiate side tillers and affect biomass yield of energy crop
Switchgrass (Panicum virgatum L.) is a dedicated lignocellulosic feedstock for bioenergy production. The SQUAMOSA PROMOTER-BINDING PROTEIN (SBP-box)-LIKE transcription factors (SPLs) change plant architecture and...
Citation: Biotechnology for Biofuels 2016 9:101 -
A markerless gene deletion and integration system for Thermoanaerobacter ethanolicus
Thermoanaerobacter ethanolicus produces a considerable amount of ethanol from a range of carbohydrates and is an attractive candidate for applications in bioconversion processes. A gen...
Citation: Biotechnology for Biofuels 2016 9:100 -
Tissue-specific distribution of hemicelluloses in six different sugarcane hybrids as related to cell wall recalcitrance
Grasses are lignocellulosic materials useful to supply the billion-tons annual requirement for renewable resources that aim to produce transportation fuels and a variety of chemicals. However, the polysacchari...
Citation: Biotechnology for Biofuels 2016 9:99 -
A multifunctional thermophilic glycoside hydrolase from Caldicellulosiruptor owensensis with potential applications in production of biofuels and biochemicals
Thermophilic enzymes have attracted much attention for their advantages of high reaction velocity, exceptional thermostability, and decreased risk of contamination. Exploring efficient thermophilic glycoside h...
Citation: Biotechnology for Biofuels 2016 9:98 -
Promise of combined hydrothermal/chemical and mechanical refining for pretreatment of woody and herbaceous biomass
Production of advanced biofuels from woody and herbaceous feedstocks is moving into commercialization. Biomass needs to be pretreated to overcome the physicochemical properties of biomass that hinder enzyme ac...
Citation: Biotechnology for Biofuels 2016 9:97 -
Engineering a natural Saccharomyces cerevisiae strain for ethanol production from inulin by consolidated bioprocessing
The yeast Saccharomyces cerevisiae is an important eukaryotic workhorse in traditional and modern biotechnology. At present, only a few S. cerevisiae strains have been extensively used as engineering hosts. Recen...
Citation: Biotechnology for Biofuels 2016 9:96 -
Co-production of hydrogen and ethanol by pfkA-deficient Escherichia coli with activated pentose-phosphate pathway: reduction of pyruvate accumulation
Fermentative hydrogen (H2) production suffers from low carbon-to-H2 yield, to which problem, co-production of ethanol and H2 has been proposed as a solution. For improved co-production of H2 and ethanol, we devel...
Citation: Biotechnology for Biofuels 2016 9:95 -
Energy-efficient biomass processing with pulsed electric fields for bioeconomy and sustainable development
Fossil resources-free sustainable development can be achieved through a transition to bioeconomy, an economy based on sustainable biomass-derived food, feed, chemicals, materials, and fuels. However, the trans...
Citation: Biotechnology for Biofuels 2016 9:94 -
Elucidation of the roles of adhE1 and adhE2 in the primary metabolism of Clostridium acetobutylicum by combining in-frame gene deletion and a quantitative system-scale approach
Clostridium acetobutylicum possesses two homologous adhE genes, adhE1 and adhE2, which have been proposed to be responsible for butanol production in solventogenic and alcohologenic cu...
Citation: Biotechnology for Biofuels 2016 9:92 -
Modulation of the balance of fatty acid production and secretion is crucial for enhancement of growth and productivity of the engineered mutant of the cyanobacterium Synechococcus elongatus
Among the three model cyanobacterial species that have been used for engineering a system for photosynthetic production of free fatty acids (FFAs), Synechococcus elongatus PCC7942 has been the least successful; t...
Citation: Biotechnology for Biofuels 2016 9:91 -
Metabolic engineering of Bacillus subtilis for chiral pure meso-2,3-butanediol production
2,3-Butanediol (2,3-BD) with low toxicity to microbes, could be a promising alternative for biofuel production. However, most of the 2,3-BD producers are opportunistic pathogens that are not suitable for indus...
Citation: Biotechnology for Biofuels 2016 9:90 -
Insights into isoprene production using the cyanobacterium Synechocystis sp. PCC 6803
Cyanobacteria are phototrophic prokaryotes that convert inorganic carbon as CO2 into organic compounds at the expense of light energy. They need only inorganic nutrients and can be cultivated to high densities us...
Citation: Biotechnology for Biofuels 2016 9:89 -
Model-based optimization and scale-up of multi-feed simultaneous saccharification and co-fermentation of steam pre-treated lignocellulose enables high gravity ethanol production
High content of water-insoluble solids (WIS) is required for simultaneous saccharification and co-fermentation (SSCF) operations to reach the high ethanol concentrations that meet the techno-economic requireme...
Citation: Biotechnology for Biofuels 2016 9:88 -
Epoxidation and etherification of alkaline lignin to prepare water-soluble derivatives and its performance in improvement of enzymatic hydrolysis efficiency
Due to the depletion of fossil resources and their environmental impact, woody biomass has received much attention as an alternative resource. Lignin, as the third most abundant biopolymer from biomass, is now...
Citation: Biotechnology for Biofuels 2016 9:87 -
Expression and characterization of a novel 1,3-regioselective cold-adapted lipase from Rhizomucor endophyticus suitable for biodiesel synthesis
The biodiesel production can be carried out by transesterification using either chemical or enzymatic process. The enzymatic transesterification is more promising as it offers an environmental friendly option ...
Citation: Biotechnology for Biofuels 2016 9:86 -
Real-time single molecular study of a pretreated cellulose hydrolysis mode and individual enzyme movement
The main challenges of large-scale biochemical conversion involve the high costs of cellulolytic enzymes and the inefficiency in enzymatic deconstruction of polysaccharides embedded in the complex structure of...
Citation: Biotechnology for Biofuels 2016 9:85 -
Comprehensive molecular characterization of Methylobacterium extorquens AM1 adapted for 1-butanol tolerance
The toxicity of alcohols is one of the major roadblocks of biological fermentation for biofuels production. Methylobacterium extorquens AM1, a facultative methylotrophic α-proteobacterium, has been engineered to ...
Citation: Biotechnology for Biofuels 2016 9:84 -
Production of medium-chain fatty acids and higher alcohols by a synthetic co-culture grown on carbon monoxide or syngas
Synthesis gas, a mixture of CO, H2, and CO2, is a promising renewable feedstock for bio-based production of organic chemicals. Production of medium-chain fatty acids can be performed via chain elongation, utilizi...
Citation: Biotechnology for Biofuels 2016 9:82